G212507


Basic Information

Item Value
gene id G212507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101308272 ~ 101310677 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241192
CCTGTAGGTTGTctaagaggagatggagaggtcaGAATGGCAGCTACAGACACACGGTTGTGTCCCcactggcactctattccctatatagtgcactactttagaccagagccctatagaaccctattccctatatacagtgcactactttagaccagggccctatagaaccctattccctatatagttcactactttagaccagggccctatagaaccctattccctatatagtgcactactttagaccagagccctatagaaccctattccctatatagtgcactactttagaccatggcCCATAGACTTGTAACAGTATAGTCAACACTAACGTCTCTAATCATGTGTTCAGTTGAAACAAGTTAATTCATTGTCTTCCGTTCACTTCACTTCATTGATCTTTTCAGAAATGGGTCTCTCATAACTGAGAGCTTTTACAGACAAGAGTTTTACTAGAATACAGGCCTACATGTGCATGTCATTATCTGACTAGAAATATTATGTTGAACATAATTCTATTTGTACGGTTAAATGCTAGATACAGAAGCGTTGTATATCAAACTGAGCTTCCTGAGAGAGGATAGTGCTCGCCATTGGACAGAGCAGCCAGATGTCAGACTTCCTGAGAGAGGATAGTGCTCGCCATTGGACAGAGCAGCCAGATGTCAGACTTCCTGAGAGAGGATAGTGCTCGCCATTGGACAGAGCAGCCAGATGTCAGACTTCCTGAGACACATTCAGTACAGTTAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241192 True 756 lncRNA 0.43 2 101308272 101310677

Neighbor

gene id symbol gene type direction distance location
LOC110501031 LOC106592222 coding upstream 343486 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 449010 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 459931 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 652666 100638574 ~ 100655606 (+)
LOC110501156 LOC106567469 coding upstream 864036 100438486 ~ 100444236 (+)
best1 LOC102229874 coding downstream 34608 101345285 ~ 101371174 (+)
LOC110516669 LOC106590745 coding downstream 323953 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 727361 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 873682 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 951440 102262117 ~ 102278883 (+)
G212464 NA non-coding upstream 21735 101238488 ~ 101286537 (+)
G212463 NA non-coding upstream 39296 101233864 ~ 101268976 (+)
G212467 NA non-coding upstream 68600 101238986 ~ 101239672 (+)
G212459 NA non-coding upstream 75263 101232799 ~ 101233009 (+)
G212190 NA non-coding upstream 84928 101156265 ~ 101223344 (+)
G212512 NA non-coding downstream 8327 101319004 ~ 101321207 (+)
G212513 NA non-coding downstream 12678 101323355 ~ 101325277 (+)
G212526 NA non-coding downstream 32323 101343000 ~ 101344123 (+)
G212496 frih non-coding downstream 63476 101374153 ~ 101380327 (+)
G212549 NA non-coding downstream 70411 101381088 ~ 101382002 (+)
G211809 LOC107574289 other upstream 840115 100467678 ~ 100468157 (+)
G211779 NA other upstream 846291 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 1408395 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 1493897 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 1586289 99720179 ~ 99721983 (+)
G212656 NA other downstream 171734 101482181 ~ 101486796 (+)
G212674 NA other downstream 199083 101509760 ~ 101516104 (+)
G212690 NA other downstream 243708 101554385 ~ 101561158 (+)
G212863 NA other downstream 432222 101742899 ~ 101745974 (+)
G213051 NA other downstream 866732 102177409 ~ 102177918 (+)

Expression


Co-expression Network