G212513


Basic Information

Item Value
gene id G212513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101323355 ~ 101325277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241205
TGCCTTTGTCTGTTCAGTTGTCTTGATTcattgggtgaataaacttgggtGTGAGTGTTCACTCCGTTCACTTAGAATCGAACACTATATAAAACACAATTTTGATGTCAACAACATTGGGCGTGGACACGGTGGGGAACATGTGTGTCTGAGGAAGTGTGATGTCATTCatgtttgtggaaatgtaaaCAATAActtattgattatttattttttttgggtTTGTTGTAAAATAAAATGACCAACCAAGTTCCTATAATTTGATATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGAGGAACTGTCTGTTTTAATGTGATATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGAGGAACTGTCTGTTTTAATGTGACATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGAGGAACTGTCTGTTTTAATGTGACATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGAGGAACTGTCTGTTTTAATGTGATATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGAGGAGCTGTCTGTTTTAATGTGATATTCATCACAGAAGACAGGTGTAGTCACCAGGAGGAGAGGAACTGTCCGTTTTAATGTGATATTCATCACAGAAGACAGGTGTAGTCACCAAGAGGAGCATGAATAGGCAGTGAATGAGAATAATAGGTGAATAAGAACAAGTGATGGAAGTAGTGCAGATGTGATTAATGTTGTCAAGATcgtatcaacaacaacaacaacaaaaaattaccCAGAATACATTTCCTGAGGAAAACAACCTAGTAAAAACGTTGACTGATCACTCACTTGGGCCCGCCACACTCTATGGCGTTGGCTTTGACCATGGGTAAAGCAGACACGGCCACCGGTTCGATGGTCAGCGAGTTGTTCTCCACTGCATTCTGCACCAACTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241205 True 947 lncRNA 0.41 2 101323355 101325277

Neighbor

gene id symbol gene type direction distance location
LOC110501031 LOC106592222 coding upstream 358569 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 464093 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 475014 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 667749 100638574 ~ 100655606 (+)
LOC110501156 LOC106567469 coding upstream 879119 100438486 ~ 100444236 (+)
best1 LOC102229874 coding downstream 20008 101345285 ~ 101371174 (+)
LOC110516669 LOC106590745 coding downstream 309353 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 712761 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 859082 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 936840 102262117 ~ 102278883 (+)
G212512 NA non-coding upstream 2148 101319004 ~ 101321207 (+)
G212507 NA non-coding upstream 12678 101308272 ~ 101310677 (+)
G212464 NA non-coding upstream 36818 101238488 ~ 101286537 (+)
G212463 NA non-coding upstream 54379 101233864 ~ 101268976 (+)
G212467 NA non-coding upstream 83683 101238986 ~ 101239672 (+)
G212526 NA non-coding downstream 17723 101343000 ~ 101344123 (+)
G212496 frih non-coding downstream 48876 101374153 ~ 101380327 (+)
G212549 NA non-coding downstream 55811 101381088 ~ 101382002 (+)
G212550 NA non-coding downstream 58031 101383308 ~ 101383662 (+)
G212498 NA non-coding downstream 61275 101386552 ~ 101387956 (+)
G211809 LOC107574289 other upstream 855198 100467678 ~ 100468157 (+)
G211779 NA other upstream 861374 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 1423478 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 1508980 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 1601372 99720179 ~ 99721983 (+)
G212656 NA other downstream 157134 101482181 ~ 101486796 (+)
G212674 NA other downstream 184483 101509760 ~ 101516104 (+)
G212690 NA other downstream 229108 101554385 ~ 101561158 (+)
G212863 NA other downstream 417622 101742899 ~ 101745974 (+)
G213051 NA other downstream 852132 102177409 ~ 102177918 (+)

Expression


Co-expression Network