XLOC_021528



Basic Information


Item Value
gene id XLOC_021528
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 13624913 ~ 13625531 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044793
gtaaaaatTGCCTCATGCATGCAAAACTCAACATTATCAATCTCCCATAAGCCAAATGAGAGataaaattgtgtttatataGCTCAAACACCCTAAACATCTTCTGCTCCGATAAAATCCGTTTGTGGCTTGGTTTTGCGGAGTGTTAGAACAGTTGTGCTCTGCTAACCCATTAAGACATAAACACACTGTGTCTTACCCTCAACTGAGCTGACTAAAGGCTGGATATATCCCATAATGCATTGCCTGGAAGCTCCCGAAAAGGCTGAGATAAAGCCATCGGGGTTGGGGGTCTTGGATAGGTAGTCAACAGGGGTCACAACCTTCT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044793 True 328 lncRNA 0.43 2 13624913 13625531

Neighbor


gene id symbol gene type direction distance location
XLOC_021527 dre-mir-1388 coding upstream 20593 13604218 ~ 13604320 (+)
XLOC_021526 uckl1b coding upstream 24909 13528053 ~ 13600004 (+)
XLOC_021524 ZNF512B coding upstream 108061 13375359 ~ 13516852 (+)
XLOC_021525 CR749171.1 coding upstream 182191 13442608 ~ 13442722 (+)
XLOC_021523 samd10b coding upstream 292050 13124085 ~ 13332863 (+)
XLOC_021529 NA coding downstream 30504 13656035 ~ 13656319 (+)
XLOC_021530 zbtb46 coding downstream 96295 13721826 ~ 13806495 (+)
XLOC_021531 lmod3 coding downstream 189447 13814978 ~ 13822642 (+)
XLOC_021532 NA coding downstream 219026 13844557 ~ 13850492 (+)
XLOC_021533 NA coding downstream 302808 13928339 ~ 13941278 (+)
XLOC_021518 NA non-coding upstream 794647 12673403 ~ 12830266 (+)
XLOC_021520 NA non-coding upstream 924499 12698971 ~ 12700414 (+)
XLOC_021519 NA non-coding upstream 949492 12674927 ~ 12675421 (+)
XLOC_021536 NA non-coding downstream 608194 14233725 ~ 14235007 (+)
XLOC_021539 CR388373.1 non-coding downstream 842472 14468003 ~ 14470571 (+)

Expression



Co-expression Network