XLOC_021529


Basic Information

Item Value
gene id XLOC_021529
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 13656035 ~ 13656319 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044659
CtgcatgtaaaatgtaaaatatattgaaCTTAACATggcaattttaataaaatagcgCTAATAAAAAAGAAGATATAAAGAGTGGCAGTCACACATGTTCATCAagcatgtatttacattaaaaaacaatagaaaataatGCATTGGCAAGGAAAAACATGCTCTATGTGAATGGCTCCTTATCAACCAATAACTTTTGAAGAGAAAATTCAGAACCTGTTTATACAAATAACAAGATCAAATGATTAAAGTGTGGCTTGCTGgtttacacaaaaaaaatgcttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044659 True 285 lncRNA 0.29 1 13656035 13656319

Neighbor

gene id symbol gene type direction distance location
XLOC_021528 NA coding upstream 30504 13624913 ~ 13625531 (+)
XLOC_021527 dre-mir-1388 coding upstream 51715 13604218 ~ 13604320 (+)
XLOC_021526 uckl1b coding upstream 56031 13528053 ~ 13600004 (+)
XLOC_021524 ZNF512B coding upstream 139183 13375359 ~ 13516852 (+)
XLOC_021525 CR749171.1 coding upstream 213313 13442608 ~ 13442722 (+)
XLOC_021530 zbtb46 coding downstream 65507 13721826 ~ 13806495 (+)
XLOC_021531 lmod3 coding downstream 158659 13814978 ~ 13822642 (+)
XLOC_021532 NA coding downstream 188238 13844557 ~ 13850492 (+)
XLOC_021533 NA coding downstream 272020 13928339 ~ 13941278 (+)
XLOC_021534 cacnb3a coding downstream 441189 14097508 ~ 14180307 (+)
XLOC_021518 NA non-coding upstream 825769 12673403 ~ 12830266 (+)
XLOC_021536 NA non-coding downstream 577406 14233725 ~ 14235007 (+)
XLOC_021539 CR388373.1 non-coding downstream 811684 14468003 ~ 14470571 (+)
XLOC_021542 CR759764.1 non-coding downstream 1696814 15353133 ~ 15353249 (+)

Expression


Co-expression Network