G212646


Basic Information

Item Value
gene id G212646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101468718 ~ 101468965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241408
aaatctgtggttgaaattcacaGGTCCcccagtcaagcagtgaatttcaaccacagacTCAACCACAAAAGAACAGGGTAGTGCATTTCACATTACTTTTGGATGATAATTGGATTTTAAGGCCCGTATGAAcgtcctgcttaatataatgtttgtgtcacCATCGCAAATCAACCGTGTTATACTTAATCAGGTCAACCTCTTCCTGGTTCTCTGCTATCGTTTTTTCAACGACCTCGAATATCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241408 True 248 lncRNA 0.44 1 101468718 101468965

Neighbor

gene id symbol gene type direction distance location
best1 LOC102229874 coding upstream 97544 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 503932 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 609456 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 620377 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 813112 100638574 ~ 100655606 (+)
LOC110516669 LOC106590745 coding downstream 165665 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 569073 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 715394 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 793152 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 838532 102307497 ~ 102314434 (+)
G212645 NA non-coding upstream 478 101467814 ~ 101468240 (+)
G212642 NA non-coding upstream 2169 101464858 ~ 101466549 (+)
G212637 NA non-coding upstream 7364 101458843 ~ 101461354 (+)
G212630 NA non-coding upstream 12763 101455099 ~ 101455955 (+)
G212629 NA non-coding upstream 13382 101454668 ~ 101455336 (+)
G212650 NA non-coding downstream 3969 101472934 ~ 101473178 (+)
G212652 NA non-coding downstream 5791 101474756 ~ 101474960 (+)
G212654 NA non-coding downstream 8573 101477538 ~ 101477750 (+)
G212656 NA non-coding downstream 13216 101482181 ~ 101486796 (+)
G212659 NA non-coding downstream 22797 101491762 ~ 101493034 (+)
G211809 LOC107574289 other upstream 1000561 100467678 ~ 100468157 (+)
G211779 NA other upstream 1006737 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 1568841 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 1654343 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 1746735 99720179 ~ 99721983 (+)
G212674 NA other downstream 40795 101509760 ~ 101516104 (+)
G212690 NA other downstream 85420 101554385 ~ 101561158 (+)
G212863 NA other downstream 273934 101742899 ~ 101745974 (+)
G213051 NA other downstream 708444 102177409 ~ 102177918 (+)

Expression


Co-expression Network