G212747


Basic Information

Item Value
gene id G212747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101476053 ~ 101476472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241588
aactctgtttattaagtttttaacatacacacacacagacaagacaaagcaatataaataatatactcaactagaaaaaaaatacaaataaaaatacaaataaaaaatagctttaaagataccatactttagacaagttaaacacaccaggcagaaggctacagaggttaaagggcaatctatagtacagggacagagcaaacacctcaccattgttcctgtaaacagtcaagggataagggtggagaaatgcaaccactcacagacagtcatggccacagaccgaccatccactggacaaaaaaaaagtttacaatgctttaaaataaaatgattattcatgtaggcgtgaacaaaatgtaaaaataactgggaaaaacaagctcacacttcagtctctgcctgggcaagatgaacaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241588 True 420 lncRNA 0.35 1 101476053 101476472

Neighbor

gene id symbol gene type direction distance location
pgghg pgghg coding downstream 25889 101414312 ~ 101450164 (-)
incenp inceb coding downstream 67216 101394024 ~ 101408837 (-)
fth1b frih coding downstream 82488 101374491 ~ 101393565 (-)
LOC110501267 LOC106584791 coding downstream 132639 101318996 ~ 101343789 (-)
LOC110501260 NA coding downstream 165843 101306077 ~ 101310210 (-)
LOC110501253 LOC106584787 coding upstream 5670 101482142 ~ 101553750 (-)
LOC118944013 NA coding upstream 59558 101536030 ~ 101536754 (-)
LOC110512506 LOC106590753 coding upstream 83795 101560267 ~ 101595386 (-)
LOC118944014 NA coding upstream 224914 101701386 ~ 101703960 (-)
LOC118944015 NA coding upstream 229533 101706005 ~ 101706647 (-)
G212649 NA non-coding downstream 3938 101471827 ~ 101472115 (-)
G212644 NA non-coding downstream 8629 101467219 ~ 101467424 (-)
G212643 NA non-coding downstream 9296 101464915 ~ 101466757 (-)
G212638 NA non-coding downstream 14206 101458877 ~ 101461847 (-)
G212634 NA non-coding downstream 18344 101457279 ~ 101457709 (-)
G212764 NA non-coding upstream 32301 101508773 ~ 101509738 (-)
G212768 LOC106592832 non-coding upstream 44620 101521092 ~ 101521930 (-)
G212739 NA non-coding upstream 77930 101554402 ~ 101556378 (-)
G212784 NA non-coding upstream 121544 101598016 ~ 101598241 (-)
G212785 NA non-coding upstream 130321 101606793 ~ 101607517 (-)
LOC110502631 LOC106592148 other downstream 296292 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 761800 100662972 ~ 100716213 (-)
LOC110502607 ano5 other downstream 996263 100461545 ~ 100543552 (-)
G211904 LOC100136012 other downstream 1020620 100455149 ~ 100455433 (-)
LOC110500995 LOC106561801 other downstream 1316098 100155072 ~ 100161971 (-)
G212829 LOC106613263 other upstream 235766 101712238 ~ 101712847 (-)
G212836 NA other upstream 242895 101719367 ~ 101719732 (-)
LOC110517830 LOC105018063 other upstream 266543 101743015 ~ 101746551 (-)
G213475 NA other upstream 909657 102386129 ~ 102531578 (-)
G214030 NA other upstream 1342896 102819368 ~ 102819829 (-)

Expression


Co-expression Network