G212660


Basic Information

Item Value
gene id G212660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101491887 ~ 101492631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241437
AGTCAGGAAACAGGTCAGAGATATTATAATGACTCACTACTATGACAGTCAGGAAGCaggacagagacattataatgacTCACTACTATGACAGTCAGGAAACAGGTCAGCGATATTGTAATGACAGTCAGGAAACAGGACAGAGATATTATAATGACTCACTTCTATGACAGTCAGGAAACAGGTCAGAGATATTATAATG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241437 True 202 lncRNA 0.39 2 101491887 101492631

Neighbor

gene id symbol gene type direction distance location
best1 LOC102229874 coding upstream 120713 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 527101 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 632625 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 643546 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 836281 100638574 ~ 100655606 (+)
LOC110516669 LOC106590745 coding downstream 141999 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 545407 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 691728 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 769486 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 814866 102307497 ~ 102314434 (+)
G212656 NA non-coding upstream 5091 101482181 ~ 101486796 (+)
G212654 NA non-coding upstream 14137 101477538 ~ 101477750 (+)
G212652 NA non-coding upstream 16927 101474756 ~ 101474960 (+)
G212650 NA non-coding upstream 18709 101472934 ~ 101473178 (+)
G212646 NA non-coding upstream 22922 101468718 ~ 101468965 (+)
G212668 NA non-coding downstream 51527 101544158 ~ 101579963 (+)
G212690 NA non-coding downstream 61793 101554385 ~ 101561158 (+)
G212693 NA non-coding downstream 72539 101565170 ~ 101566409 (+)
G212699 pnpla2 non-coding downstream 86030 101578661 ~ 101579068 (+)
G212705 NA non-coding downstream 92549 101585180 ~ 101589863 (+)
G211809 LOC107574289 other upstream 1023730 100467678 ~ 100468157 (+)
G211779 NA other upstream 1029906 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 1592010 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 1677512 99777695 ~ 99818794 (+)
G212674 NA other downstream 17129 101509760 ~ 101516104 (+)
G212863 NA other downstream 250268 101742899 ~ 101745974 (+)
G213051 NA other downstream 684778 102177409 ~ 102177918 (+)
G213055 NA other downstream 745672 102238303 ~ 102239540 (+)

Expression


Co-expression Network