G212768 (LOC106592832)


Basic Information

Item Value
gene id G212768
gene name LOC106592832
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101521092 ~ 101521930 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241611
ACGACATCACTACTGTCCTCTTAGACTGGACCAACTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGACCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCAGCACCTCTAATACACAACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCAGCACCTCTAATACACAACTGTCCTCTTAGAATGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCATCTACATCACTACTGTCCTCTTAGACTGGACCAACTACATCACCACCTCTAATACACTACTGACCTCTTAGACTGGACCAACGACATCACTACTGTCCTCTTAGACTGGACCAACGACATCAC

Function

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 12A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241611 True 580 lncRNA 0.46 2 101521092 101521930

Neighbor

gene id symbol gene type direction distance location
pgghg pgghg coding downstream 70928 101414312 ~ 101450164 (-)
incenp inceb coding downstream 112255 101394024 ~ 101408837 (-)
fth1b frih coding downstream 127527 101374491 ~ 101393565 (-)
LOC110501267 LOC106584791 coding downstream 177678 101318996 ~ 101343789 (-)
LOC110501260 NA coding downstream 210882 101306077 ~ 101310210 (-)
LOC118944013 NA coding upstream 14100 101536030 ~ 101536754 (-)
LOC110512506 LOC106590753 coding upstream 38337 101560267 ~ 101595386 (-)
LOC118944014 NA coding upstream 179456 101701386 ~ 101703960 (-)
LOC118944015 NA coding upstream 184075 101706005 ~ 101706647 (-)
LOC110517830 LOC105018063 coding upstream 223338 101743015 ~ 101746551 (-)
G212764 NA non-coding downstream 11354 101508773 ~ 101509738 (-)
G212747 NA non-coding downstream 44620 101476053 ~ 101476472 (-)
G212649 NA non-coding downstream 48977 101471827 ~ 101472115 (-)
G212644 NA non-coding downstream 53668 101467219 ~ 101467424 (-)
G212643 NA non-coding downstream 54335 101464915 ~ 101466757 (-)
G212739 NA non-coding upstream 32472 101554402 ~ 101556378 (-)
G212784 NA non-coding upstream 76086 101598016 ~ 101598241 (-)
G212785 NA non-coding upstream 84863 101606793 ~ 101607517 (-)
G212786 NA non-coding upstream 86671 101608601 ~ 101608827 (-)
G212787 NA non-coding upstream 91557 101613487 ~ 101613690 (-)
LOC110502631 LOC106592148 other downstream 341331 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 806839 100662972 ~ 100716213 (-)
LOC110502607 ano5 other downstream 1041302 100461545 ~ 100543552 (-)
G211904 LOC100136012 other downstream 1065659 100455149 ~ 100455433 (-)
LOC110500995 LOC106561801 other downstream 1361137 100155072 ~ 100161971 (-)
G212829 LOC106613263 other upstream 190308 101712238 ~ 101712847 (-)
G212836 NA other upstream 197437 101719367 ~ 101719732 (-)
G213475 NA other upstream 864199 102386129 ~ 102531578 (-)
G214030 NA other upstream 1297438 102819368 ~ 102819829 (-)

Expression


Co-expression Network