G212715


Basic Information

Item Value
gene id G212715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101611880 ~ 101612945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241516
gttccatcaggtagactatacacagACAGTGTTCCATCAGgtagactatacacatagacagtgttccatcaggtagactatacacatagaccgtgttccatcaggtagactatacacagacagtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacacagacagtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacatagaccgtgttccatcaggtagactatacacatagaccgtgttccatcaggtagactatacacagACAGTGTTCTATCCCATTCTATTCAACCCTATCCCATTCTATTCAACCCTatcccattctattctattctatcccatTCTATTCAACCCTATCCCATTCTATTCAACCCTATCCCATTCTATTCAACCCTatcccattctattctattctatcccatTCTATTCTATCCCATTCTATTCAACCCTatcccattctattctattctatcccatTCTATTC
>TU241517
gttccatcaggtagactatacacagACAGTGTTCCATCAGgtagactatacacatagacagtgttccatcaggtagactatacacatagaccgtgttccatcaggtagactatacacagacagtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacatagaCCGTGTTCCATCAGGTAGACGATACACAGACAGTGTTCCatcaggtagactatacacatagaCCGTGTTCCATCAGGTAGACGATACATAGACAGTGTTCCatcaggtagactatacacatagaccgtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacatagacagtgttccatcaggtagactatacacatagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241516 False 528 lncRNA 0.50 3 101611880 101612945
TU241517 True 437 lncRNA 0.43 2 101611880 101612378

Neighbor

gene id symbol gene type direction distance location
best1 LOC102229874 coding upstream 240706 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 647094 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 752618 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 763539 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 956274 100638574 ~ 100655606 (+)
LOC110516669 LOC106590745 coding downstream 21685 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 425093 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 571414 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 649172 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 694552 102307497 ~ 102314434 (+)
G212714 NA non-coding upstream 29 101611448 ~ 101611851 (+)
G212711 NA non-coding upstream 4296 101606776 ~ 101607584 (+)
G212710 NA non-coding upstream 12481 101598717 ~ 101599399 (+)
G212705 NA non-coding upstream 22017 101585180 ~ 101589863 (+)
G212699 pnpla2 non-coding upstream 32812 101578661 ~ 101579068 (+)
G212726 NA non-coding downstream 32199 101645144 ~ 101645414 (+)
G212727 NA non-coding downstream 32841 101645786 ~ 101646151 (+)
G212729 NA non-coding downstream 41558 101654503 ~ 101654934 (+)
G212735 NA non-coding downstream 77032 101689977 ~ 101690819 (+)
G212737 NA non-coding downstream 81320 101694265 ~ 101694465 (+)
G212690 NA other upstream 55510 101554385 ~ 101561158 (+)
G212674 NA other upstream 95776 101509760 ~ 101516104 (+)
G212656 NA other upstream 125084 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1143723 100467678 ~ 100468157 (+)
G211779 NA other upstream 1149899 100459657 ~ 100461981 (+)
G212863 NA other downstream 129954 101742899 ~ 101745974 (+)
G213051 NA other downstream 564464 102177409 ~ 102177918 (+)
G213055 NA other downstream 625358 102238303 ~ 102239540 (+)
G213185 NA other downstream 901262 102514207 ~ 102516302 (+)
G213221 NA other downstream 982586 102595531 ~ 102599866 (+)

Expression


Co-expression Network