G212727


Basic Information

Item Value
gene id G212727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101645786 ~ 101646151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241532
CCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTGTGTCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTGTCCCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTGTGTCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTGTCCCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTGTCCCCTGCTGCTCTGTCCAATGGTGTTACTGAGACCACTGTCCCCTGCTGCTCTGTCCAATGGTGTTACTGAGACCACTGTCCCCTGCTGCTCTGTCCAGTGGTGTTACTGAGACCACTATGTCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241532 True 326 lncRNA 0.46 2 101645786 101646151

Neighbor

gene id symbol gene type direction distance location
best1 LOC102229874 coding upstream 274612 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 681000 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 786524 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 797445 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 990180 100638574 ~ 100655606 (+)
LOC110502669 LOC107698134 coding downstream 391887 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 538208 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 615966 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 661346 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 954467 102600618 ~ 102608333 (+)
G212726 NA non-coding upstream 372 101645144 ~ 101645414 (+)
G212715 NA non-coding upstream 32841 101611880 ~ 101612945 (+)
G212714 NA non-coding upstream 33935 101611448 ~ 101611851 (+)
G212711 NA non-coding upstream 38202 101606776 ~ 101607584 (+)
G212710 NA non-coding upstream 46387 101598717 ~ 101599399 (+)
G212729 NA non-coding downstream 8352 101654503 ~ 101654934 (+)
G212735 NA non-coding downstream 43826 101689977 ~ 101690819 (+)
G212737 NA non-coding downstream 48114 101694265 ~ 101694465 (+)
G212702 NA non-coding downstream 49629 101695780 ~ 101706656 (+)
G212828 NA non-coding downstream 66416 101712567 ~ 101712857 (+)
G212690 NA other upstream 89416 101554385 ~ 101561158 (+)
G212674 NA other upstream 129682 101509760 ~ 101516104 (+)
G212656 NA other upstream 158990 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1177629 100467678 ~ 100468157 (+)
G211779 NA other upstream 1183805 100459657 ~ 100461981 (+)
G212863 NA other downstream 96748 101742899 ~ 101745974 (+)
G213051 NA other downstream 531258 102177409 ~ 102177918 (+)
G213055 NA other downstream 592152 102238303 ~ 102239540 (+)
G213185 NA other downstream 868056 102514207 ~ 102516302 (+)
G213221 NA other downstream 949380 102595531 ~ 102599866 (+)

Expression


Co-expression Network