G212828


Basic Information

Item Value
gene id G212828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101712567 ~ 101712857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241685
cattttgcagggctctggcagtgctcctcctgctcctccttgcacaaaggcggaggtagcggtcctgctgctgggtcgttgccctcctacggcctcctccacgtctcctgatgtactggcctgtctcctggtagcgcctccatgctctggacactacactgacagacacagcaaaccttcttgccacagatcgcattgatgtgccatcctggatgagctgcactacctgagccacttgtgtgggttgtagactccgtctcatgctaccactagagtaaaAGCAcctccagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109523355 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241685 True 291 lncRNA 0.47 1 101712567 101712857

Neighbor

gene id symbol gene type direction distance location
LOC110516669 LOC106590745 coding upstream 17083 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 341393 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 747781 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 853305 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 864226 100785531 ~ 100848341 (+)
LOC110502669 LOC107698134 coding downstream 325181 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 471502 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 549260 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 594640 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 887761 102600618 ~ 102608333 (+)
G212702 NA non-coding upstream 5911 101695780 ~ 101706656 (+)
G212737 NA non-coding upstream 18102 101694265 ~ 101694465 (+)
G212735 NA non-coding upstream 21748 101689977 ~ 101690819 (+)
G212729 NA non-coding upstream 57633 101654503 ~ 101654934 (+)
G212727 NA non-coding upstream 66416 101645786 ~ 101646151 (+)
G212834 NA non-coding downstream 4132 101716989 ~ 101717278 (+)
G212839 NA non-coding downstream 8243 101721100 ~ 101721363 (+)
G212845 NA non-coding downstream 12133 101724990 ~ 101725998 (+)
G212863 NA non-coding downstream 30472 101742899 ~ 101745974 (+)
G212870 NA non-coding downstream 122724 101835581 ~ 101835791 (+)
G212690 NA other upstream 156197 101554385 ~ 101561158 (+)
G212674 NA other upstream 196463 101509760 ~ 101516104 (+)
G212656 NA other upstream 225771 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1244410 100467678 ~ 100468157 (+)
G211779 NA other upstream 1250586 100459657 ~ 100461981 (+)
G213051 NA other downstream 464552 102177409 ~ 102177918 (+)
G213055 NA other downstream 525446 102238303 ~ 102239540 (+)
G213185 NA other downstream 801350 102514207 ~ 102516302 (+)
G213221 NA other downstream 882674 102595531 ~ 102599866 (+)

Expression


Co-expression Network