G212863


Basic Information

Item Value
gene id G212863
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101742899 ~ 101745974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241742
TGTAATCTTCAGTATTCTTCATTTTTATGAAAAATGACAtcattttttgttgtattttcttttcatgttgttgttgtttcatcATCCTCTTTTTTTCTCGCTCCAATCGTTGTCATGGGAATGGCAGGAATAAGTGTTCCGCAGTTCAGCTCAAAGTTCAGTTAATTCAAGTTAGTTTTTTAATAATCTCTAAGTTTTTTGGAGCTACAACACAGCACCCACAGCACACAGACAACAAGGGGTCCAGCAAGGGGGAGAGTCACTAATGttgtgccagagagagagagggagagacagagacagagacagagagacagagagagacagagacagagagacaaagagagagagagagagagagagagacagagagacaaagagagagagagagagagagagagagagagagagagagagagagagagagagagagacaacagcatCAAGTGTCAATAATTCAATTTGTCCAGCGATCTTCAGGTTATGTCATCATCACAAACAGTATTGATTGGTTTCTTTCTCTCTACAACTTCAGTTGAACATTATACCACTttccagagaagagagagaaggttaTAACAAGGAGAAAAGATAGAGAGGGTAGACAcgttcagaaagagagagagagattgctggGACAATTCCAACCAatatagacacacacaggagagaaggagagggagacatcacacaggagagaaggagagggggtaatcacagaggagagaaggagagggggtaatcacagaggagagaaggggacatCACACAGGGGAGAAGGGGACATCAcgcaggagagaaggagagggggacatcacacaggagagaaggggACATCACACAGGGGAGAAGGGGACATCACGCAGGAGAGAAGGAGTAGGGGacatcacacaggagagaaggagagggagacatcacagaggagagaaggagagggggtaatcacagaggagagaaggggacatCACACAGGGAAGAAGGGGACATCAcgcaggagagaaggagagggggacatcacgcaggagagaaggagagggggacatcacacaggagagaaggagagggagacatcacagaggagagaaggagagggggacATCAcgcaggagagaaggagagggggagagggagacatcacagaggagagaaggagagggggacatcacacaggagagaaggagagaaggagagggagacatcacacaggagagaaggagagggagacatcacacaggagagaaggagagaaggagagggagacatcacacaggagagaaggagacatcacagatgagagaaggagagggagacatcacagaggagagaaggagaagggcacatcacacaggagagaatgagagaaggagagggagacatcacacaggagagaaggagagaaggagagggagacatcactcaggagagaaggagaagggcacatcacacaggagagaaggggagggggagagggaaatatcacagaggagaaaaggagggaaggagagggagacatcacacatgagagaaggagagaaggacagacggagagaagaagagggagacatcacacaggagagaaggagagaaggacagaaggagagaaggagagagagacatcacagaggagagaaggagagaaggacagaaggagagggagacatcacacaggagagatggagagggagacatcacagaggagagacggagagaaggacagaagaacagaaggagagaaggagagggagacatcacagaggagagatggagagaaggacagGGACACCTCATTTCCATACAGATTATTTTCTAGAGGGGTTTTGTCTGTCTCAGAATTACTTTACACTCATATTACTGTTACTTGGAATATTTGTTTATAATGGCACTGCATATTTTATTTAAAGATTTTCTGTGATTCCATGGGACATCGTTGCAGTGGCCAAAATGGCACCGTACCTACAGTAGGCTAGTACAGGCTGCAGTGGGGAAGAGACAAACCACACGTCAGATCTCAAcataaggacagacagacagaaacagggggACCATTGGCAGGGTGGCGGAGGGAGACAGGGGTGAATGAGAAGAAaccgaggaagagaggagagatgtataATAAAAcagatagaggagaagagaggagggcagaggggtCTAAAGGTAAAGAGAGCGGATGGCTAATTGTACCCGTATTTTGCAGCCTGGTAGCTAGTCAGTGTTGTGCATAAGGATGGGGATTGGAcgttggagggaggggggggggtatgggGTCACTGAAGAGGGGGTAGGCGGGACCATCAGGCCTTGAGAGCGTGCCATTGGGCCACATTGGTACGCGGCCGGCCCATCATGTCCTTCCAGTGTTTCACTTCCGCTGGACCACTCTTCCATGA
>TU241737
gagacaacagcatCAAGTGTCAATAATTCAATTTGTCCAGCGATCTTCAGGTTATGTCATCATCACAAACAGTATTGATTGGTTTCTTTCTCTCTACAACTTCAGTTGAACATTATACCACTttccagagaagagagagaaggttaTAACAAGGAGAAAAGATAGAGAGGGTAGACAcgttcagaaagagagagagagattgctggGACAATTCCAACCAatatagacacacacaggagagaaggagagggagacatcacacaggagagaaggagagggggtaATCAcgcaggagagaaggagagggggacatcacacaggagagaaggggACATCACACAGGGGAGAAGGGGACATCACGCAGGAGAGAAGGAGTAGGGGacatcacacaggagagaaggagagggagacatcacagaggagagaaggagagggggtaatcacagaggagagaaggggacatCACACAGGGAAGAAGGGGACATCAcgcaggagagaaggagagggggacatcacgcaggagagaaggagagggggacatcacacaggagagaaggagagggagacatcacagaggagagaaggagagggggacatcacacaggagagaaggggacatcacacaggagagaaggagagggggagagggagacatcacagaggagagaaggagaggggtacatcacagaggagagaaggagagggggacatcacacaggagagaaggagagggggagagggaaatatcatagaggagaaaaggagagaaggagagggagacatcacacatgagagaaggagagaaggacagacggagagaagaagagggagacatcacacaggagagaatgagagaaggacagaaggagagggagacatgacacaggagagatggagagggagacatcacagaggagagacggagagaaggacagaaggacagaaggagagaaggagagggagacatcacacaggagagatggagagggagacatcacagaggagagacggagagaaggacagaagaacagaaggagagaaggagagggagacatcacagaggagagatggagagaaggacagGGACACCTCATTTCCATACAGATTATTTTCTAGAGGGGTTTTGTCTGTCTCAGAATTACTTTACACTCATATTACTGTTACTTGGAATATTTGTTTATAATGGCACTGCATATTTTATTTAAAGATTTTCTGTGATTCCATGGGACATCGTTGCAGTGGCCAAAATGGCACCGTACCTACAGTAGGCTAGTACAGGCTGCAGTGGGGAAGAGACAAACCACACGTCAGATCTCAAcataaggacagacagacagaaacagggggACCATTGGCAGGGTGGCGGAGGGAGACAGGGGTGAATGAGAAGAAaccgaggaagagaggagagatgtataATAAAAcagatagaggagaagagaggagggcagaggggtCTAAAGGTAAAGAGAGCGGATGGCTAATTGTACCCGTATTTTGCAGCCTGGTAGCTAGTCAGTGTTGTGCATAAGGATGGGGATTGGAcgttggagggaggggggggggtatgggGTCACTGAAGAGGGGGTAGGCGGGACCATCAGGCCTTGAGAGCGTGCCATTGGGCCACATTGGTACGCGGCCGGCCCATCATGTCCTTCCAGTGTTTCACTTCCGCTGGACCACTCTTCCATGA

Function

NR:

description
synaptotagmin-7-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241742 False 2390 TUCP 0.42 3 101742899 101745974
TU241737 True 1696 lncRNA 0.50 3 101743329 101745974

Neighbor

gene id symbol gene type direction distance location
LOC110516669 LOC106590745 coding upstream 47845 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 372155 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 778543 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 884067 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 894988 100785531 ~ 100848341 (+)
LOC110502669 LOC107698134 coding downstream 292064 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 438385 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 516143 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 561523 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 854644 102600618 ~ 102608333 (+)
G212845 NA non-coding upstream 17331 101724990 ~ 101725998 (+)
G212839 NA non-coding upstream 21966 101721100 ~ 101721363 (+)
G212834 NA non-coding upstream 26051 101716989 ~ 101717278 (+)
G212828 NA non-coding upstream 30472 101712567 ~ 101712857 (+)
G212702 NA non-coding upstream 36673 101695780 ~ 101706656 (+)
G212870 NA non-coding downstream 89607 101835581 ~ 101835791 (+)
G212872 NA non-coding downstream 91455 101837429 ~ 101837648 (+)
G212885 NA non-coding downstream 102650 101848624 ~ 101849053 (+)
G212898 NA non-coding downstream 112589 101858563 ~ 101858802 (+)
G212958 NA non-coding downstream 232503 101978477 ~ 101978738 (+)
G212690 NA other upstream 186959 101554385 ~ 101561158 (+)
G212674 NA other upstream 227225 101509760 ~ 101516104 (+)
G212656 NA other upstream 256533 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1275172 100467678 ~ 100468157 (+)
G211779 NA other upstream 1281348 100459657 ~ 100461981 (+)
G213051 NA other downstream 431435 102177409 ~ 102177918 (+)
G213055 NA other downstream 492329 102238303 ~ 102239540 (+)
G213185 NA other downstream 768233 102514207 ~ 102516302 (+)
G213221 NA other downstream 849557 102595531 ~ 102599866 (+)
G213645 NA other downstream 933401 102679375 ~ 102680096 (+)

Expression


Co-expression Network