G213031


Basic Information

Item Value
gene id G213031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102117356 ~ 102118240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241933
GGACAAGACTAGTTAGCTCTATAACAATCTGTATTGACCGAAGAGGACAAGACCAGTTAGCTCTATAACAACCTGTGTTGACCGAAGAGGACAAGACTAGTTAGCTCTATAACAATCTGTATTGATTGAAGAGGACAAGACTAGTTAGCCCTATAACAAGCTGTATTGATTGAAGAGGACAAGACTAGTTAGCTCTATAACAATCTGTATTGATTGAAGAGGACAAGACTAGTTCACTATGTCTCAACCTGTATTGACCGAAGAGGACAAGACTAGTTAGCTCTATAACAATCTGTATTGACCGAAGAGGACAAGACTAGTTAGCTCTATAACAACCTGTGTTGACCGAAGAGGACAAGACTAGTTAGCTCTATAACAATCTGTATTGATTGAAGAGGACAAGACTAGTTAGCGCTATAACAATCTGTATTGACCGAAGAGGACAAGGCTAGTTAGCTCTATAACAATCTGTATTGACCGAAGAGGACAAGACTAGTTCACTCTGTCTCATCCTGTATTGACCGAAGAGGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597777

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241933 True 532 lncRNA 0.40 3 102117356 102118240

Neighbor

gene id symbol gene type direction distance location
LOC110516669 LOC106590745 coding upstream 421872 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 746182 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 1152570 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 1258094 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 1269015 100785531 ~ 100848341 (+)
LOC110501421 LOC106561865 coding downstream 66119 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 143877 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 189257 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 482378 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 564582 102682822 ~ 102721240 (+)
G212999 NA non-coding upstream 76586 102040231 ~ 102040770 (+)
G212958 NA non-coding upstream 138618 101978477 ~ 101978738 (+)
G212898 NA non-coding upstream 258554 101858563 ~ 101858802 (+)
G212885 NA non-coding upstream 268303 101848624 ~ 101849053 (+)
G212872 NA non-coding upstream 279708 101837429 ~ 101837648 (+)
LOC110502669 LOC107698134 non-coding downstream 47087 102038038 ~ 102167821 (+)
G213050 NA non-coding downstream 57971 102176211 ~ 102176457 (+)
G213064 NA non-coding downstream 75749 102193989 ~ 102199459 (+)
G213065 NA non-coding downstream 81354 102199594 ~ 102199929 (+)
G213066 NA non-coding downstream 85431 102203671 ~ 102211768 (+)
G212863 NA other upstream 371382 101742899 ~ 101745974 (+)
G212690 NA other upstream 560986 101554385 ~ 101561158 (+)
G212674 NA other upstream 601252 101509760 ~ 101516104 (+)
G212656 NA other upstream 630560 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1649199 100467678 ~ 100468157 (+)
G213051 NA other downstream 59169 102177409 ~ 102177918 (+)
G213055 NA other downstream 120063 102238303 ~ 102239540 (+)
G213185 NA other downstream 395967 102514207 ~ 102516302 (+)
G213221 NA other downstream 477291 102595531 ~ 102599866 (+)
G213645 NA other downstream 561135 102679375 ~ 102680096 (+)

Expression


Co-expression Network