XLOC_021537 (CR354537.1)



Basic Information


Item Value
gene id XLOC_021537
gene name CR354537.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 14269311 ~ 14270315 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042777
gtatgcgatttcggacgcagccacagtGTCTCAAACTCACAattgcatgtacacacacacacacacacacactctcttacgcacaaacacaaactcacacacttgcactcacacgcacacatactcttacactcacaaacacaaacacacacacgcacacacacacacgcacacgcgcacacacaaagtCCCTCTTAACACTTAAAcattaacacaaacaaacaaactctctcccactcacacacacttacactcatgTTCAAATACTCTctcttgcactcacacacaaactctctctcatGCTCAAacccacacacaaactcacaagcatggacacacacacaaacacacacaaaaactcccTCTACTCCTTTCTCTtactcacacacagacaaacgcacgcacacgcacacataccCACAGTGTCTCAAACTCACAattgcatgtacacacacacgcaagcatgcacgcacgcatgcatggacgcacacacacaaacacactctcacacacaaacacatactcacACGcctgcacactcacacacagacatgcatgtactctcacattcacaaacacaaacGCGCGCACACATTTCTCCCTCTAttttacacatacatacacacagtctCTCTTAAACATTTTCGCACACTCGCGCACAAACACAAACTCCTTTtcccactcacacacacttacGCACATTCACACTTCTCCCTCTTTTTTACACATACACGCAGACACGAGTGTCTTACACTCACAGATCTCAGTCACAAACGCATATGTACAAagtcatgcaaacacacacacacgcaagcacatgcacacgcacacacacacccacacacacttctCCCTCTTTcttacacatacacgcacaatctctctcatacacatacatacaagcCTCTCACACACGTTTTCTCATGCATCACACACGCatgtgcacacactcacacacacacacctgctgtgtGATTTATTAATCTCTGAACAGTAGAGTATCTA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100627

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042777 True 1005 mRNA 0.46 1 14269311 14270315
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Neighbor


gene id symbol gene type direction distance location
XLOC_021536 NA coding upstream 34304 14233725 ~ 14235007 (+)
XLOC_021535 birc7 coding upstream 38805 14217508 ~ 14230506 (+)
XLOC_021534 cacnb3a coding upstream 89004 14097508 ~ 14180307 (+)
XLOC_021533 NA coding upstream 328033 13928339 ~ 13941278 (+)
XLOC_021532 NA coding upstream 418819 13844557 ~ 13850492 (+)
XLOC_021538 CR388373.3 coding downstream 162008 14432323 ~ 14541590 (+)
XLOC_021539 CR388373.1 coding downstream 197688 14468003 ~ 14470571 (+)
XLOC_021540 si:rp71-79p20.2 coding downstream 320168 14590483 ~ 14731892 (+)
XLOC_021541 exosc10 coding downstream 501664 14771979 ~ 14803801 (+)
XLOC_021542 CR759764.1 coding downstream 1082818 15353133 ~ 15353249 (+)
XLOC_021529 NA non-coding upstream 612992 13656035 ~ 13656319 (+)
XLOC_021528 NA non-coding upstream 643780 13624913 ~ 13625531 (+)
XLOC_021543 NA non-coding downstream 1207869 15478184 ~ 15478737 (+)
XLOC_021544 NA non-coding downstream 1208430 15478745 ~ 15483879 (+)
XLOC_021545 NA non-coding downstream 1479437 15749752 ~ 15756516 (+)

Expression


Expression of XLOC_021537(CR354537.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Expression of XLOC_021537(CR354537.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network