G213050


Basic Information

Item Value
gene id G213050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102176211 ~ 102176457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241952
cagaaacatggcaaacgttgtttagaatcaatcctcaaggtgtttttcaaatatcgattcgataatatatccaccgggacaattggtttctcagtagaagcgattggaataatggctacctctgtactttacgcaagattttctccgGGAGCATCATGTGaacacttgcgcaatgtagctccctacgggtattcttcaacataaatgcataaaactatgtcacaatgctgtagacaccttggggaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241952 True 247 lncRNA 0.36 1 102176211 102176457

Neighbor

gene id symbol gene type direction distance location
LOC110502669 LOC107698134 coding upstream 8390 102038038 ~ 102167821 (+)
LOC110516669 LOC106590745 coding upstream 480727 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 805037 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 1211425 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 1316949 100848174 ~ 100860603 (+)
LOC110501421 LOC106561865 coding downstream 7902 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 85660 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 131040 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 424161 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 506365 102682822 ~ 102721240 (+)
G213031 NA non-coding upstream 57971 102117356 ~ 102118240 (+)
G212999 NA non-coding upstream 135441 102040231 ~ 102040770 (+)
G212958 NA non-coding upstream 197473 101978477 ~ 101978738 (+)
G212898 NA non-coding upstream 317409 101858563 ~ 101858802 (+)
G213064 NA non-coding downstream 17532 102193989 ~ 102199459 (+)
G213065 NA non-coding downstream 23137 102199594 ~ 102199929 (+)
G213066 NA non-coding downstream 27214 102203671 ~ 102211768 (+)
G213102 NA non-coding downstream 111056 102287513 ~ 102287787 (+)
G213103 commd4 non-coding downstream 112255 102288712 ~ 102292227 (+)
G212863 NA other upstream 430237 101742899 ~ 101745974 (+)
G212690 NA other upstream 619841 101554385 ~ 101561158 (+)
G212674 NA other upstream 660107 101509760 ~ 101516104 (+)
G212656 NA other upstream 689415 101482181 ~ 101486796 (+)
G211809 LOC107574289 other upstream 1708054 100467678 ~ 100468157 (+)
G213051 NA other downstream 952 102177409 ~ 102177918 (+)
G213055 NA other downstream 61846 102238303 ~ 102239540 (+)
G213185 NA other downstream 337750 102514207 ~ 102516302 (+)
G213221 NA other downstream 419074 102595531 ~ 102599866 (+)
G213645 NA other downstream 502918 102679375 ~ 102680096 (+)

Expression


Co-expression Network