G213064


Basic Information

Item Value
gene id G213064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102193989 ~ 102199459 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241967
tttcatttttttcatttttttttattttgcctttatttaaccaggtaggctagttgagaacaagttctcatttgcaaatgcgacctggccaagataaagcaaagcagtttgacacatacaacaacacagagttacacatggaataaacaaaacatagtcaataatacagtagaacaaaagaaaacaaaaagtctatatacagtgagtgcaaatcaGGTAAGATAAGGtcgttaaggcaataaataggccatcgtggcgaagtaattacaatatagcaattaaacactggaatggtagatgtgcataagatgaatgtgcaagtagagatactggggtgcacaggagcaagataaataaatacagtatggggatgaggtaggtagatagatgggctgtttacagatgggctatgtacaggagcagtgatctgtaagctgctctgacagctggtgcttaaagctagtgagggagatatgagtctccagcttcagtgatttttacagttcgttccagtcattggcagcagagaattggaagggaagacgaccaaaggaggagttggctttgggggtgaccagtgagatatacctgctggagcacgtgttACGAGTGggagctgctatggtgaccaccTAGCAGAGATTTGTAGATAACCTGtacccagtgggtttggcgacgagtatgaaacgagggccaaccaacgagagcatacaggtcgcaatggtggatagtgtatggggctttggtgacaaaacggatggcactgtgatagactgcatccagtttgttgagtagagtgttggagacaattttatagattatatatagatcaccgaagtcaaggatctgtaggatggtcagttttacgagggtatgtttggcagcatgagtgaaggatgctttgatgCGATACAGGAAGCCAActatagatttaattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctaaccaggtatttgtagttgtccacgtaatctaagtcagagccgtccagagtagtgatgctggatgggcgagcaggtgtgggcagtgatcgTTTGAATAGCATGCGTTTAGTTTTACTtccgtttaagagcagttggacgccatggaaggagagttgtatggcattgaagctcgtctggaggttagtacggagaaggtacggtggaatacgaaatggtcggtaatcaaaatcaaataaaatgtatttataaagcccttcgtacatcagctgatatctcaaagtgctgtacagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataataatcacaggcagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgccatgtagtcctgaggcatgttccaagggctcaggtcctccgagagagagaaagaaagcgagaaagagataattagagagagcatacttaatcagtgactcaacccactcatgtgacgcacccctcctagggacggtatgaaagagccctagtaagccagtgactcagcccctgtaatagggttagaggcagagaaacccagtggaaagaggggaaccagccaggcagagacagcaagggcggttcgttgctccagagcctttccgttcaccttcacactcctgggccagactacactcaatcatatgacccaatgaagagatgagtcttcagtaaagacttagttgagaccgagtttgcgtctctcacatgggtaggcagaccattccataaaatggagctctataggagaaagccctgcctccagctgtttgcttagaaatcctagggacaattaggaggcctgtgtcttgtgaccgaagcgtacgtgtaggtatgtatgacaggaccaaatcagagagataggtaggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgccttgacaggaagccagtgtagggaggctagcactggagtaatatgatattttttttttgttctagtcaggattttagcagctgtatttagcactaactgaagtttatttagtgctttatccgggtagccggatgGTGTAATGGTATAAGAACTGGCCGTcgagcacgttcggaacagagagtaaaaggagcaggtttctgggcatgatagcatagattcaaggcatattttacagacaaaggtaaggtaggatgtgagtacattggaggtaaacctaggcattgagtaatggtGAGAGCGATATAGACtgtagagacgtttaaaccaggtgatgtcatcgcatacgTAGGAGGTgggacaacatggttggttaaggcatattgagcagggctagaggctctacagtgaaataagacagtaatcactaaccaggacagtaatggatgaggcatattgatattagagagaggcatgtgtagccaagtgaacatatgggtccagtgagtggttgggctgactggggacacggcgattcagacagttagcaggccgatacTAACAGTTAGTAGTTAGCAGACTGGGGCTGGCAAGCCAGCAGTTACCAGACACGGTttgcaagcaagcagttagcaggggctagcagttaacagaccggggctagcaagttagTCTTTGGGGGACGTCACGATGGGGGTGAGTCTGTCTTTGCCTCTctgtgcggtgacgtcgatagaccagtcgtggaattagtagggttccaattagctctaggtagctagcaggccagGAAGGTTTGCAGAATGGGTCTTCAGCGGACGTCgcacctgaggggcctgttggaatcctcgggcagattatgtcggttttccagtcgtagaggatcattgaaaatatgaatttgttcttaactgacttgcctagttaaataaagatgaaaaatgtgttttaaatcTACAGTACAGTTAATGGATGGTACAGTACATCTACGGTACAGTAAATCTACGGTACAGTAAATCTACAGTACAgttcatctacagtacagtacatctacagttcatctacagtacatctacagtacagttcatctacagtacatctacagtacagtacaggatatcAACAGTACAGTTCATCTACAGTACAGTTCATCTACAGTACAgttcatatacagtacagtacagttcatctacagtacagttcatctacagtacagtacatctacagtacagttcatatacagtacatctacagtacagttcatccacagtacagtacagtttatcTACAATACAGTTCATCTACATTACCGTTCATCTACAGTACCGTACATagacagtctacagtacagtacatctacagtacaggacatctacagtacaggacatctacagtacaggacatctacagtacatctacagtacagtacatctacagtacaggacatctacagtacaggacatctacagtacagttcacctacagtacatctacagtacagttcatctacagtacatatacattacagttcatctacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241967 True 3670 lncRNA 0.57 3 102193989 102199459

Neighbor

gene id symbol gene type direction distance location
LOC110502669 LOC107698134 coding upstream 26168 102038038 ~ 102167821 (+)
LOC110516669 LOC106590745 coding upstream 498505 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 822815 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 1229203 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 1334727 100848174 ~ 100860603 (+)
LOC110501429 LOC106561864 coding downstream 62658 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 108038 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 401159 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 483363 102682822 ~ 102721240 (+)
LOC110501485 LOC106591986 coding downstream 536078 102735537 ~ 102756512 (+)
G213050 NA non-coding upstream 17532 102176211 ~ 102176457 (+)
G213031 NA non-coding upstream 75749 102117356 ~ 102118240 (+)
G212999 NA non-coding upstream 153219 102040231 ~ 102040770 (+)
G212958 NA non-coding upstream 215251 101978477 ~ 101978738 (+)
G213065 NA non-coding downstream 135 102199594 ~ 102199929 (+)
G213066 NA non-coding downstream 4212 102203671 ~ 102211768 (+)
G213102 NA non-coding downstream 88054 102287513 ~ 102287787 (+)
G213103 commd4 non-coding downstream 89253 102288712 ~ 102292227 (+)
G213104 NA non-coding downstream 93411 102292870 ~ 102293088 (+)
G213051 NA other upstream 16071 102177409 ~ 102177918 (+)
G212863 NA other upstream 448015 101742899 ~ 101745974 (+)
G212690 NA other upstream 637619 101554385 ~ 101561158 (+)
G212674 NA other upstream 677885 101509760 ~ 101516104 (+)
G212656 NA other upstream 707193 101482181 ~ 101486796 (+)
G213055 NA other downstream 38844 102238303 ~ 102239540 (+)
G213185 NA other downstream 314748 102514207 ~ 102516302 (+)
G213221 NA other downstream 396072 102595531 ~ 102599866 (+)
G213645 NA other downstream 479916 102679375 ~ 102680096 (+)
G213775 NA other downstream 864858 103064317 ~ 103065327 (+)

Expression


Co-expression Network