G213055


Basic Information

Item Value
gene id G213055
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102238303 ~ 102239540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241958
gtttggaacagttgggggtCCCAGatgagaggtttggaacagctagttgtcctgaggagaggtttggaacagctgtgggtcctgaggagaggtttggaacagctgtgtgtcctgaggagaggtttggaacagctgtgggtcctgaggagaggtttggaacagctgtgggtcctgaggagaggtttggaacagctgggggtctcagaggagaggtttggaacagctaGTTGTCCTGagaagaggtttggaacagctAGTTatcccgaggagaggtttggaacagctaGTTGTCCCGAGTAGAGGTTTGGAACAGCTAGTTGTCCTGagaagaggtttggaacagctgggggtctccaaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctgggggtctccgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttgggacggctgggggtcccagaggagaggtttggaacagctaGTTGTCCTGagaagaggtttggaacagctAGTTATCCCGAGGAGACGTTTGGAACAGCTAGTTGTCCCGAGTAGAGGTTAGGAACAGCTAGTTGTCCTGagaagaggtttggaacagctgggggtctccgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctgggggtctccgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctgggggtctccgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttggaacagctagttgtcctgaggagaggtttgggacggctgggggtcccagaggagaggtttgagaatcCCTGTCTTATCCGCTTTATCAAGCCATCCACCATTCGCATCTTTATACAGTGATTCCCTGATTAATAAAAATATTCCTGTATTGAAACTCCTTGTTATTGTCTCTTAAATAAACATTTTTCAGTATTTGATGTGAATTTGGGGCATTTGGCTTAACTTTTAATAAACA

Function

NR:

description
PREDICTED: basic salivary proline-rich protein 1-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU241958 True 1178 TUCP 0.50 2 102238303 102239540

Neighbor

gene id symbol gene type direction distance location
LOC110501421 LOC106561865 coding upstream 43 102184359 ~ 102238260 (+)
LOC110502669 LOC107698134 coding upstream 70482 102038038 ~ 102167821 (+)
LOC110516669 LOC106590745 coding upstream 542819 101634630 ~ 101695484 (+)
best1 LOC102229874 coding upstream 867129 101345285 ~ 101371174 (+)
LOC110501031 LOC106592222 coding upstream 1273517 100929368 ~ 100964786 (+)
LOC110501429 LOC106561864 coding downstream 22577 102262117 ~ 102278883 (+)
LOC110501451 LOC106561861 coding downstream 67957 102307497 ~ 102314434 (+)
LOC118936918 NA coding downstream 361078 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 443282 102682822 ~ 102721240 (+)
LOC110501485 LOC106591986 coding downstream 495997 102735537 ~ 102756512 (+)
G213066 NA non-coding upstream 26535 102203671 ~ 102211768 (+)
G213065 NA non-coding upstream 38374 102199594 ~ 102199929 (+)
G213064 NA non-coding upstream 38844 102193989 ~ 102199459 (+)
G213050 NA non-coding upstream 61846 102176211 ~ 102176457 (+)
G213102 NA non-coding downstream 47973 102287513 ~ 102287787 (+)
G213103 commd4 non-coding downstream 49172 102288712 ~ 102292227 (+)
G213104 NA non-coding downstream 53330 102292870 ~ 102293088 (+)
G213113 NA non-coding downstream 68753 102308293 ~ 102387508 (+)
G213129 NA non-coding downstream 110788 102350328 ~ 102352286 (+)
G213051 NA other upstream 60385 102177409 ~ 102177918 (+)
G212863 NA other upstream 492329 101742899 ~ 101745974 (+)
G212690 NA other upstream 681933 101554385 ~ 101561158 (+)
G212674 NA other upstream 722199 101509760 ~ 101516104 (+)
G212656 NA other upstream 751507 101482181 ~ 101486796 (+)
G213185 NA other downstream 274667 102514207 ~ 102516302 (+)
G213221 NA other downstream 355991 102595531 ~ 102599866 (+)
G213645 NA other downstream 439835 102679375 ~ 102680096 (+)
G213775 NA other downstream 824777 103064317 ~ 103065327 (+)
pias1b LOC106584817 other downstream 882049 103087359 ~ 103125059 (+)

Expression


Co-expression Network