G213213


Basic Information

Item Value
gene id G213213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102574084 ~ 102574793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242166
GTGGGGGAATAGGCATGGTGGGGGAATAGGCATGGTGGGGACGGGGGATAGGTACGGGGTTAGGGGTGGTGTTAGGTACGGGGTTAGGGATGGtgttagtgtaacggatgtgaaacggctagctagttagcggtggtgcgcgctaaacagcgtttcaatcggtgacgtcacttactttgagaccttgaagtagtggttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaatgatgctttgtgggtgactgttgttgatgtgtgcagagggtccctggttcgcacccgggtatgggcgagggggcGGTTTAAAGTTATAATGTTACATTAGGTAGGGGGTTAGGGATGGTGTTAGGGATGGTGTTAGGTACGGGGTTAGGTACGGGGTTAGGGATGGTGTTAGGTAGGGGGGATAGGTACGGGGGTAGGGGGGATAGGGATGGTGTTAGGTAGGGGGTTAGGGATGGTGTTAGGTAGGGGGGATAGGTACGGTGTTAGGTAGGGGGGGATAGGTACGGGGTTAGGGGTGGTGTTAGGTACAGGGTTAGGGGTGGTGTTAGGTACGGGGTTAGGGGTGGTGTTAGGTACGGGGTTAGGGGTGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242166 True 615 lncRNA 0.51 2 102574084 102574793

Neighbor

gene id symbol gene type direction distance location
LOC110501451 LOC106561861 coding upstream 259650 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 295201 102262117 ~ 102278883 (+)
LOC110501421 LOC106561865 coding upstream 335824 102184359 ~ 102238260 (+)
LOC110502669 LOC107698134 coding upstream 406263 102038038 ~ 102167821 (+)
LOC110516669 LOC106590745 coding upstream 878600 101634630 ~ 101695484 (+)
LOC118936918 NA coding downstream 25825 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 108029 102682822 ~ 102721240 (+)
LOC110501485 LOC106591986 coding downstream 160744 102735537 ~ 102756512 (+)
c2h15orf61 cssa10h15orf61 coding downstream 281097 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 494940 103069733 ~ 103083283 (+)
G213114 NA non-coding upstream 42463 102529572 ~ 102531621 (+)
G213191 NA non-coding upstream 45345 102522082 ~ 102528739 (+)
G213180 NA non-coding upstream 65206 102508536 ~ 102508878 (+)
G213171 NA non-coding upstream 125115 102445518 ~ 102448969 (+)
G213151 NA non-coding upstream 163008 102410719 ~ 102411076 (+)
G213633 LOC106604990 non-coding downstream 96270 102671063 ~ 102671372 (+)
G213643 NA non-coding downstream 103438 102678231 ~ 102678462 (+)
G213646 NA non-coding downstream 106446 102681239 ~ 102681446 (+)
G213669 NA non-coding downstream 156838 102731631 ~ 102731925 (+)
G213679 NA non-coding downstream 184858 102759651 ~ 102760006 (+)
G213185 NA other upstream 57782 102514207 ~ 102516302 (+)
G213055 NA other upstream 334544 102238303 ~ 102239540 (+)
G213051 NA other upstream 396166 102177409 ~ 102177918 (+)
G212863 NA other upstream 828110 101742899 ~ 101745974 (+)
G212690 NA other upstream 1017714 101554385 ~ 101561158 (+)
G213221 NA other downstream 20738 102595531 ~ 102599866 (+)
G213645 NA other downstream 104582 102679375 ~ 102680096 (+)
G213775 NA other downstream 489524 103064317 ~ 103065327 (+)
pias1b LOC106584817 other downstream 546796 103087359 ~ 103125059 (+)

Expression

G213213 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G213213 Expression in each Bioproject

Bar chart with 20 bars.
G213213 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network