G213221


Basic Information

Item Value
gene id G213221
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102595531 ~ 102599866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242175
AGCATGGGAACAAACACCGCGCCTGCCCTCATCACATGGGGGAAGGGACACTGCTTCTGGGCTACATACTGCCCCAGTCTCTGGAGCACATTCTGGAGGGCAGCCTGGGTCTCTGGTCCCCTCAGCCACACCTCCCTGGCCTCAGAACCCAGCAGAGAGGTCACCTTCTGGGCCTTGGGTGGGGAAATGGCGGTGGAGGTAAGGGAGATGTCCAGCTGGGACAGCCAGGTTTGGAGCTCTGTGGGTGGGGTGTGGGACACACAGCTGGAAACCAGGTTACAAAGTAAGAGGTGCAGCTCTAGGAAGTGCTGTCTGGCTGGTCGGGAGCTGTTGTTGCTGTCTGAAAGGGCATGAGGGCTGCGGCTGGATTTGGCTACAGCTGTAGGGTCAGTGGGTGACTGTGGGACCTCTGTAGAGCAGGGAGGGGGAGCAACAGCCCGGAGCATGTTATCTGGCAGGACGATCTTATAAGTGGATAGTTTGAGACATTGAGGAGGGATGTTTTGAAGGTTCAGTTTGGTGGTGGCTGGGTTGGTGGATTGGGGAGAGCTGGATGATTTAGGGTGTGGTGTAGCAGTCTGGTCATAGGGCTTCTGATGGGCCTGGGGAGGGTGGTGCACGTTATGGGTGAACGCGCCAACTATCCTATGCCTTATTGAGAGGGGTTGGGGTGGAGTTGTTGATTTGGGACGTAGGTGGGGTTGCGGCGGATTGGGTGGATAGTGGTTGGACAGGGGCTGGGATGGATGGTGGTTGGACTGGGATGGATGGTGGTTGGACAGGGGCTGGGATGGATGGTGGTTGGACAGGGGCTGGGATGGATGGTGGTTGGACAGGGGCTGGGATGGATGGTGGTTGGACCGGGGCTGGTGGTGCTGAGTTTGGGACTGATGGTGGTGCTGAGTTTGGGACTGATGGTGGTGCTGAGTTTGGGACTGATGGTGGTGCTCGTTGTAAGTAAAAGATCCCTCCATCACACGTCTATCTGTAGCCGACATAATAGAAATATATTTATCTGACGCTATTGACAATTTACTGTCCAGTTGATCAGATTCACATTTCTTAATAACACCCACGGTGAGATCATGTACAAACACACCCGGctctgttgttgctgctgccacctccatctcttcctcttccttaATAACCACTTTAGTCTGCATGTCGTCATCAGTCTTCActtccacctccctctctggttcttgCTGtggttcctcctcctcttccttaaCCACTTTAATCTGCAAATCGGCGGTCTTCActtccacctccctctctggttcCTGCGGTGATTCACTGAAAACAGGCACTACGGGTGTCTTCTGTGTAGTGTCTGATCTGACTACAATACCCAGAATCCTCTGCTGGACTACAGGCCTCTGCTGTTCTGAGGCTGGTCGGACTACATGGTTACCAATCCTGTGATTGATTgatacaggcttcccttcctctcgTTCAGGGTCTCTCTCAGGCCTGTGTGGGTCAGATGTAGGgcctgtttcctgtctgtgttgATGACGTCTGTGAGGGTCTGATTGGGTCTCAGGTTTGAGCACACAGTGTCCAGAAGGATGGCGGTCAGTTCTCTGAGATCCTCTAACAGGTAGAGACAGCATGCCAGCAGCCTCTAGGTAAGCCTTGTATGGAGCCAGGCTGAAAACATTGTTGATGACTGgcatgggaggagagggagacagacagctaTCGAGTCCGCCTCCCTCTCCGttcacctctgctctccctccctctgctataTCTCCCTCTGCTATATCTCCCTCTGCTATATCTCCCTCTGCTATATCTCCCTCTGCTATATCTCCCTCTGCTATATCTCCCTCTCCGTTCGTCTTCATCTTCTGTCGTTTCTGATATAGTTCCACatcaatgacgtcatccccattgtcctgtgtgtgttttggtgagGGAGAGTCTATGTTGATGGGTCGGTCTGAGTCCGAGACCCATCTCTTCAGCATTTCTGTACCAGTAGTGATCATGTCTCCATGCACATTAGACTGAGGGACAGGACTGTCTCGAAGCCTCACTACAGTAGAACCAGTCATTCCCTGACACGTGGCGTTGTGATGGTTACGTGTAGTTGTGTGTTGGTGGTTGTTCTGGTTGGCTGTAGTTGTGTGGTGGTTGCCATAGTTTACAGCAGTTGTACACATGGCTGTAGTAGCATGGTtgttgctgtggtggtggtggtggttggctGGGTGGTTGTGATGGCCATAGTCAGCCCGTGACAGTGTGGTGGAGACAGTCAGTGGGGCTCCAGGGAGTGTGGAGTCAGAGTGTCCCCGAGATAGGTGGTGTCTCCTGGGGGAGGAGACCTGAGGAGAGGTGACTGGAGATCTGTACTGAGGCAGGGAGTAGTCCAGGGGTCTCTCAGTCCGCTGTAGGCTGctggggggagatggagaggcacAGGGTCTCTCTGGGGCTATAGCAGGGGCTCTCATCTGACCTGCTGCATTCAGGGGCATCCTGTACAATTGATGATAGGAGGGCTGGTCAAAACTCCTGAGGTATGGGTGGCTACTAGGAGCCATGTGGCTAGACATGGGGACATCAGTACTGTACATAGACTGGGTGACATGGTAGTGGGTGGGGGTTGCTGTGCTGGGAAGATGAGAAGCTAGGTGGGGTCCTGTCTGGGTGGGACTGGGAGGTAGGGGTCTTTTAGAACCTTTAGAGACCATAACATcctcccagtctctgtctctgtgcatTCCTCCTCCTGCATCTTTAAAACCTGCTCCacaactctcactctctccctccacattTGCCTGAGGATGGTAGTAAAAAATGGGCTGTGTGACTGGGAGCTGGCTGTATTTGGCCACATTGGGAGAAGAGCGGCCCTGATAAACTTGTGATGTTACCGGAACGCCATGGTGCAAAGGGGTCATGGGTTTGTATGTTGTAGGGtggaaggggtgagagggaggagagggatgggagggatggcaggagggatgagagggatgggagggatggtaggaggggtgagagggatgggaggaggggtgagaggaagaGCAGGAGGGGTGGGAAGAGACCAAGCTGTGATAGGTTGGACGTTTAGAAGGGATTTGTAAACGTTGGCATTGATCAGCCCCATAGGGGGAGGCGCCTAACTGTGAAGAGAGGGGGTCACATGTAAATGAGGAGGGGCTTCGTACGGCACGGGCCGGGGCACATGGGTAACCAATGCTGTAGGTTGGTTCCATGAAGACAGGAAATCTTTGTGCCGATACTGCTCTGTTGGGGATTCCATTGGGGTGGTGTTGGTGGTCCTTGCCATCTTTTAGAGGCAGTCTGTCTGATAGTCTCTCTGTCTCAACACCGTGCTCCGGCTGCAGAGCCCTGGGGTGGTGGTGGGAGCTAGGACTATACATCCACCCCTCATACAAATTAAGATGGGGATGGATCCTGTGTACTCCCCCCCTCTGCTCCAGACTGTGCCTCTGTCCTACAGTACAGCCCAGCTCAGAACAGCAGGGGGAGGGGTGTCCGTAGAGCGGTTTGGGAACAGccagactcagacagacagagttcTCAGACTGAGGGGAGAGGCTAACTCCTCCAACAGGGGGCTGTTTCCTCACAGCAATGGGCATAGCGATGGTCCCAGGCCCGCTGGTGGGACTCCTCAGCCCACCTGGGCTCCTGGTGTAGTAGGTAAAACCCTGCTTAGCTGGAGTGTCCTGAGCAGTAGCAGAGACAGAGTTACTACCACTAACACTACTACTCTCAGTAGAAAAAGTCTCTGCCCTGCTGTAAACTATGTGGTTTCGTAACGACCCCTCCTCCACGCTCTGAGGGGAAACCCCCACATTCCTCCTGTTCAGCAGCAACCCCTCAGAGGGGCTCCAGGAAGGTCGGAGGTCAGGGTCAGAGAGGTCGTGACCCCCGAGGTCATAGGTGAAGTAGGCCCTGTTCTGCAGAGCCTGGGTCTGGGGTGTGTGGTGGGGGGCAGAGGGGTAGTGAGCCAGGCTGGCTGGTTTAGAGAGCCCTCCTGCCTCTGTAGACGCCACACTACCAATGATGGACCCTTCCAGCCGGGGCATCTTGCTCTGGACCACCGGGGCGACAGTGAAGCTTGGCTGGACTCGTTTACTGCTGTTGCTCATCATGTGTTGACTCTGTGGTGGTCCGATAATAG

Function

NR:

description
uncharacterized protein LOC110501494

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242175 True 4177 TUCP 0.55 3 102595531 102599866

Neighbor

gene id symbol gene type direction distance location
LOC110501451 LOC106561861 coding upstream 281097 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 316648 102262117 ~ 102278883 (+)
LOC110501421 LOC106561865 coding upstream 357271 102184359 ~ 102238260 (+)
LOC110502669 LOC107698134 coding upstream 427710 102038038 ~ 102167821 (+)
LOC110516669 LOC106590745 coding upstream 900047 101634630 ~ 101695484 (+)
LOC118936918 NA coding downstream 752 102600618 ~ 102608333 (+)
slc24a1 LOC106561848 coding downstream 82956 102682822 ~ 102721240 (+)
LOC110501485 LOC106591986 coding downstream 135671 102735537 ~ 102756512 (+)
c2h15orf61 cssa10h15orf61 coding downstream 256024 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 469867 103069733 ~ 103083283 (+)
G213213 NA non-coding upstream 20738 102574084 ~ 102574793 (+)
G213114 NA non-coding upstream 63910 102529572 ~ 102531621 (+)
G213191 NA non-coding upstream 66792 102522082 ~ 102528739 (+)
G213180 NA non-coding upstream 86653 102508536 ~ 102508878 (+)
G213171 NA non-coding upstream 146562 102445518 ~ 102448969 (+)
G213633 LOC106604990 non-coding downstream 71197 102671063 ~ 102671372 (+)
G213643 NA non-coding downstream 78365 102678231 ~ 102678462 (+)
G213646 NA non-coding downstream 81373 102681239 ~ 102681446 (+)
G213669 NA non-coding downstream 131765 102731631 ~ 102731925 (+)
G213679 NA non-coding downstream 159785 102759651 ~ 102760006 (+)
G213185 NA other upstream 79229 102514207 ~ 102516302 (+)
G213055 NA other upstream 355991 102238303 ~ 102239540 (+)
G213051 NA other upstream 417613 102177409 ~ 102177918 (+)
G212863 NA other upstream 849557 101742899 ~ 101745974 (+)
G212690 NA other upstream 1039161 101554385 ~ 101561158 (+)
G213645 NA other downstream 79509 102679375 ~ 102680096 (+)
G213775 NA other downstream 464451 103064317 ~ 103065327 (+)
pias1b LOC106584817 other downstream 521723 103087359 ~ 103125059 (+)

Expression


Co-expression Network