G213679


Basic Information

Item Value
gene id G213679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102759651 ~ 102760006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242722
GTTGCTCCTTAGCTGGTCCACATAGAGGATCTCTGCGCTcacaaagcctctcagagtaggagtgctgatcttcGATAatcatcagtggtgtaaagtacttaagtaaaaacactttaaagttgAACTTAAATCGTtatttggggtatctgtactctactatttatactttactatttataacttttacttcactacattcctaaagaaaataatttacTTCACTTCATACTTTTTACCTGACACCACCCAAAagatacattttgaatgcttaacaggacaggaaaatggtcaaattcactctcttatcaagagaacatcccctgtcctccctactgcctctgatctggacgACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242722 True 356 lncRNA 0.42 1 102759651 102760006
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110501485 LOC106591986 coding upstream 3139 102735537 ~ 102756512 (+)
slc24a1 LOC106561848 coding upstream 38411 102682822 ~ 102721240 (+)
LOC118936918 NA coding upstream 151318 102600618 ~ 102608333 (+)
LOC110501451 LOC106561861 coding upstream 445217 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 480768 102262117 ~ 102278883 (+)
c2h15orf61 cssa10h15orf61 coding downstream 95884 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 309727 103069733 ~ 103083283 (+)
pias1b LOC106584817 coding downstream 327353 103087359 ~ 103125059 (+)
kbtbd4 kbtbd4 coding downstream 470143 103230149 ~ 103233417 (+)
rapsn rapsn coding downstream 495740 103255746 ~ 103274597 (+)
G213669 NA non-coding upstream 27726 102731631 ~ 102731925 (+)
G213646 NA non-coding upstream 78205 102681239 ~ 102681446 (+)
G213643 NA non-coding upstream 81189 102678231 ~ 102678462 (+)
G213633 LOC106604990 non-coding upstream 88279 102671063 ~ 102671372 (+)
G213213 NA non-coding upstream 184858 102574084 ~ 102574793 (+)
G213680 NA non-coding downstream 138 102760144 ~ 102760391 (+)
G213683 NA non-coding downstream 1641 102761647 ~ 102761971 (+)
G213682 NA non-coding downstream 2058 102762064 ~ 102764914 (+)
G213684 NA non-coding downstream 6947 102766953 ~ 102767156 (+)
G213685 NA non-coding downstream 7211 102767217 ~ 102767565 (+)
G213645 NA other upstream 79555 102679375 ~ 102680096 (+)
G213221 NA other upstream 159785 102595531 ~ 102599866 (+)
G213185 NA other upstream 243349 102514207 ~ 102516302 (+)
G213055 NA other upstream 520111 102238303 ~ 102239540 (+)
G213051 NA other upstream 581733 102177409 ~ 102177918 (+)
G213775 NA other downstream 304311 103064317 ~ 103065327 (+)

Expression

G213679 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
End of interactive chart.

G213679 Expression in each Bioproject

Bar chart with 11 bars.
G213679 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network