G213680


Basic Information

Item Value
gene id G213680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102760144 ~ 102760391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242723
gcctctgatctggaggactcactaaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaacagagaacatccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242723 True 248 lncRNA 0.46 1 102760144 102760391

Neighbor

gene id symbol gene type direction distance location
LOC110501485 LOC106591986 coding upstream 3632 102735537 ~ 102756512 (+)
slc24a1 LOC106561848 coding upstream 38904 102682822 ~ 102721240 (+)
LOC118936918 NA coding upstream 151811 102600618 ~ 102608333 (+)
LOC110501451 LOC106561861 coding upstream 445710 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 481261 102262117 ~ 102278883 (+)
c2h15orf61 cssa10h15orf61 coding downstream 95499 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 309342 103069733 ~ 103083283 (+)
pias1b LOC106584817 coding downstream 326968 103087359 ~ 103125059 (+)
kbtbd4 kbtbd4 coding downstream 469758 103230149 ~ 103233417 (+)
rapsn rapsn coding downstream 495355 103255746 ~ 103274597 (+)
G213679 NA non-coding upstream 138 102759651 ~ 102760006 (+)
G213669 NA non-coding upstream 28219 102731631 ~ 102731925 (+)
G213646 NA non-coding upstream 78698 102681239 ~ 102681446 (+)
G213643 NA non-coding upstream 81682 102678231 ~ 102678462 (+)
G213633 LOC106604990 non-coding upstream 88772 102671063 ~ 102671372 (+)
G213683 NA non-coding downstream 1256 102761647 ~ 102761971 (+)
G213682 NA non-coding downstream 1673 102762064 ~ 102764914 (+)
G213684 NA non-coding downstream 6562 102766953 ~ 102767156 (+)
G213685 NA non-coding downstream 6826 102767217 ~ 102767565 (+)
G213686 NA non-coding downstream 7225 102767616 ~ 102767848 (+)
G213645 NA other upstream 80048 102679375 ~ 102680096 (+)
G213221 NA other upstream 160278 102595531 ~ 102599866 (+)
G213185 NA other upstream 243842 102514207 ~ 102516302 (+)
G213055 NA other upstream 520604 102238303 ~ 102239540 (+)
G213051 NA other upstream 582226 102177409 ~ 102177918 (+)
G213775 NA other downstream 303926 103064317 ~ 103065327 (+)

Expression


Co-expression Network