G213684


Basic Information

Item Value
gene id G213684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102766953 ~ 102767156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242728
ACGCTATAGATAACGTTATTTTCTGCTTAAATCTATTTTGCATTTTTTTctacaaataaatgtttaaaagaTTATTTGTCCTTTGTTATGTGAACTAAAACAAAAGCTTCTAATGGTAGATTACAATAATCAGTCGCATCTTCATAGCAGTTGAATCAAAGCTGAGCTATCTATGGCAGACGCTCCCTAATTATGACATCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242728 True 204 lncRNA 0.31 1 102766953 102767156

Neighbor

gene id symbol gene type direction distance location
LOC110501485 LOC106591986 coding upstream 10441 102735537 ~ 102756512 (+)
slc24a1 LOC106561848 coding upstream 45713 102682822 ~ 102721240 (+)
LOC118936918 NA coding upstream 158620 102600618 ~ 102608333 (+)
LOC110501451 LOC106561861 coding upstream 452519 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 488070 102262117 ~ 102278883 (+)
c2h15orf61 cssa10h15orf61 coding downstream 88734 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 302577 103069733 ~ 103083283 (+)
pias1b LOC106584817 coding downstream 320203 103087359 ~ 103125059 (+)
kbtbd4 kbtbd4 coding downstream 462993 103230149 ~ 103233417 (+)
rapsn rapsn coding downstream 488590 103255746 ~ 103274597 (+)
G213682 NA non-coding upstream 2039 102762064 ~ 102764914 (+)
G213683 NA non-coding upstream 4982 102761647 ~ 102761971 (+)
G213680 NA non-coding upstream 6562 102760144 ~ 102760391 (+)
G213679 NA non-coding upstream 6947 102759651 ~ 102760006 (+)
G213669 NA non-coding upstream 35028 102731631 ~ 102731925 (+)
G213685 NA non-coding downstream 61 102767217 ~ 102767565 (+)
G213686 NA non-coding downstream 460 102767616 ~ 102767848 (+)
G213687 NA non-coding downstream 1138 102768294 ~ 102768697 (+)
G213688 NA non-coding downstream 2669 102769825 ~ 102770172 (+)
G213689 rl4a non-coding downstream 3711 102770867 ~ 102777209 (+)
G213645 NA other upstream 86857 102679375 ~ 102680096 (+)
G213221 NA other upstream 167087 102595531 ~ 102599866 (+)
G213185 NA other upstream 250651 102514207 ~ 102516302 (+)
G213055 NA other upstream 527413 102238303 ~ 102239540 (+)
G213051 NA other upstream 589035 102177409 ~ 102177918 (+)
G213775 NA other downstream 297161 103064317 ~ 103065327 (+)

Expression


Co-expression Network