G213688


Basic Information

Item Value
gene id G213688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102769825 ~ 102770172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242732
cagcaatttccaaacccctgaaggtaccacgttcatctgtacaaacaagagtacgcaagtataaacaccataggaccacgcagccgtcataccgcttagaaaggagacgcgttctgtctcctagagatgaacgtactttggtacgaaaagtgcaagtcaatccaagaacagcaaaggaccttgtgaagatgctggaggaaacaggttcaaaagtttctatatccacagtaaaacgagtcctatatcgacataacctgaaaggccgctcagcaaggaagaagccactgctccaaaaccgccataaaaaagccagaggtttgcaactgcacatggggacaaagatcgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242732 True 348 lncRNA 0.46 1 102769825 102770172

Neighbor

gene id symbol gene type direction distance location
LOC110501485 LOC106591986 coding upstream 13313 102735537 ~ 102756512 (+)
slc24a1 LOC106561848 coding upstream 48585 102682822 ~ 102721240 (+)
LOC118936918 NA coding upstream 161492 102600618 ~ 102608333 (+)
LOC110501451 LOC106561861 coding upstream 455391 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 490942 102262117 ~ 102278883 (+)
c2h15orf61 cssa10h15orf61 coding downstream 85718 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 299561 103069733 ~ 103083283 (+)
pias1b LOC106584817 coding downstream 317187 103087359 ~ 103125059 (+)
kbtbd4 kbtbd4 coding downstream 459977 103230149 ~ 103233417 (+)
rapsn rapsn coding downstream 485574 103255746 ~ 103274597 (+)
G213687 NA non-coding upstream 1128 102768294 ~ 102768697 (+)
G213686 NA non-coding upstream 1977 102767616 ~ 102767848 (+)
G213685 NA non-coding upstream 2260 102767217 ~ 102767565 (+)
G213684 NA non-coding upstream 2669 102766953 ~ 102767156 (+)
G213682 NA non-coding upstream 4911 102762064 ~ 102764914 (+)
G213689 rl4a non-coding downstream 695 102770867 ~ 102777209 (+)
G213690 NA non-coding downstream 16067 102786239 ~ 102787765 (+)
G213691 NA non-coding downstream 20941 102791113 ~ 102808252 (+)
G213713 NA non-coding downstream 63710 102833882 ~ 102834316 (+)
G213715 NA non-coding downstream 78091 102848263 ~ 102853457 (+)
G213645 NA other upstream 89729 102679375 ~ 102680096 (+)
G213221 NA other upstream 169959 102595531 ~ 102599866 (+)
G213185 NA other upstream 253523 102514207 ~ 102516302 (+)
G213055 NA other upstream 530285 102238303 ~ 102239540 (+)
G213051 NA other upstream 591907 102177409 ~ 102177918 (+)
G213775 NA other downstream 294145 103064317 ~ 103065327 (+)

Expression


Co-expression Network