G213715


Basic Information

Item Value
gene id G213715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102848263 ~ 102853457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242768
gggaatgacagtccataataaagctcagggaccagggaatgacagtccagaataaagcccagggaatgacagtccagaaaaaagcccagggaatgacagcccataataaagcccagggaccagggaatgacagtccataataaagcccagggaccagggaatgacagtccataataaagcccagggaatgacagtccaaaataaagcccagggaccagggaatgacagtccagaataaagctcagggaatgacagtccagaataaagcccagagaccagggaatgacagtccagaataaagcccagggaatgacagtccagaataaagcccagggaatgacagtccagaataaagctcagggaccagggaatgacagtccagaataaagcccagggaccaggtaatgacagtccagaataaagctcagggaccagggaatgacattCCAGAaaaaagcccagggaccagggaatgagagtccataataaagcccagggaatgacagtccataataaagcccagggaccagggaatgacagtccataataaagctcagggaccagggaatgacagtccataataaagcccagggaccagggaatgagagtccataataaagcccaagGAATGACATTCCAGAATaaagaccagggaccagggaatgacagtccagaataaagcccagggaccagggaatgacagtccataataaagcccagggaccagggaatgacagtccagaataaagctcagggaatgacagtccataataaagcccagggaccagggaatgacagtccagaataaaacccagggaatgacagtccataataaagcccagggaccagggaatgacagccCATAATAaagaccagggaatgacagtccagaataaagaccagggaccagggaatgacagtccataataaagcccagggacca

Function

NR:

description
PREDICTED: zinc finger protein 330

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242768 True 943 lncRNA 0.48 2 102848263 102853457

Neighbor

gene id symbol gene type direction distance location
LOC110501485 LOC106591986 coding upstream 91751 102735537 ~ 102756512 (+)
slc24a1 LOC106561848 coding upstream 127023 102682822 ~ 102721240 (+)
LOC118936918 NA coding upstream 239930 102600618 ~ 102608333 (+)
LOC110501451 LOC106561861 coding upstream 533829 102307497 ~ 102314434 (+)
LOC110501429 LOC106561864 coding upstream 569380 102262117 ~ 102278883 (+)
c2h15orf61 cssa10h15orf61 coding downstream 2433 102855890 ~ 102857341 (+)
skor1b LOC106561870 coding downstream 216276 103069733 ~ 103083283 (+)
pias1b LOC106584817 coding downstream 233902 103087359 ~ 103125059 (+)
kbtbd4 kbtbd4 coding downstream 376692 103230149 ~ 103233417 (+)
rapsn rapsn coding downstream 402289 103255746 ~ 103274597 (+)
G213713 NA non-coding upstream 13947 102833882 ~ 102834316 (+)
G213691 NA non-coding upstream 40011 102791113 ~ 102808252 (+)
G213690 NA non-coding upstream 60498 102786239 ~ 102787765 (+)
G213689 rl4a non-coding upstream 71054 102770867 ~ 102777209 (+)
G213688 NA non-coding upstream 78091 102769825 ~ 102770172 (+)
G213719 NA non-coding downstream 5687 102859144 ~ 102859444 (+)
G213722 NA non-coding downstream 24752 102878209 ~ 102879770 (+)
G213728 NA non-coding downstream 32623 102886080 ~ 102886373 (+)
G213729 NA non-coding downstream 36610 102890067 ~ 102890339 (+)
G213732 NA non-coding downstream 42672 102896129 ~ 102896745 (+)
G213645 NA other upstream 168167 102679375 ~ 102680096 (+)
G213221 NA other upstream 248397 102595531 ~ 102599866 (+)
G213185 NA other upstream 331961 102514207 ~ 102516302 (+)
G213055 NA other upstream 608723 102238303 ~ 102239540 (+)
G213051 NA other upstream 670345 102177409 ~ 102177918 (+)
G213775 NA other downstream 210860 103064317 ~ 103065327 (+)

Expression


Co-expression Network