LOC118964343


Basic Information

Item Value
gene id LOC118964343
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 195431 ~ 196516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975417.1
atgcacatCCTTGCTTTAGTTCCTGAGTCCGCCTCCACCCCATCTCTATCCAAGCCCCATCAACCTCTATCCCAGCCCCAGCACCAGCCCCACCCCATCTCTACCCACCCCACAACTACCCCAGTCCCACTCCACCAACCTCTACCCCAGTCCCACTCCACCCACCCTCTACCCCAGTCCCACTCCACCCACTTCTACCCCAGTCCACCTCCACCCACCTCTACCCCAGTCCCACTCCATCCACCTCGACCCCAGTCCACCTCCACCCACCTCTATCCCAGTCCACCTCCACCCACCTCTACCCCAGTCCACCGCCACCCACCTCTACCCCATTCCCACCCCACCCACCTCTACCCCAGTCCACCTCCACCCACCTCTACTCCAGTCCACCTCCACCCACCTCTACCCCAGTCCCGTTCCACCCACCTCTACCCCAGTCCCACTCCACCCACCTCTACCCCAGTCCCACTCCACCCACCTCTACCCCAGTCCACCTCCACCCACCTCTACCCCAGTCCCACTCCCACCAACCTCTACCCCAGTCCCACTCCACCCACCTCTACCCCAGTCCCCCTCCACCAACCTCTACCCCAGGCCCACTCCACCCACCTCTACCCCAGTCCcactccacccacccacctctatcccagtcccagtcccactccacCAACCTCTAATCCCAGTCCCACTCCACCCACCTCTACCCCAGTCCCCCTCCACCCACCTCTACCCCAGTCccactccaccctctccaccgCTATGCCagtcccctttcccttccccttcCACTCCACCTCAACCCCAATCTACTTCCCCTGTCCATTAACATCATGTGTCCATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975417.1 True 843 mRNA 0.63 2 195431 196516

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding downstream 17224 213740 ~ 216403 (+)
irx1a LOC106593994 coding downstream 744047 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 928801 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 1110491 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1339363 1535879 ~ 1538143 (+)
G214665 NA non-coding upstream 14094 181033 ~ 181337 (+)
G214660 NA non-coding upstream 19598 175631 ~ 175833 (+)
G214626 NA non-coding upstream 58335 136597 ~ 137096 (+)
G214612 LOC100380853 non-coding upstream 67972 126495 ~ 127459 (+)
G214598 NA non-coding upstream 82773 111380 ~ 112658 (+)
G214685 NA non-coding downstream 1688 198204 ~ 198452 (+)
G214717 NA non-coding downstream 50642 247158 ~ 251869 (+)
G214727 NA non-coding downstream 83798 280314 ~ 281924 (+)
G214802 NA non-coding downstream 119928 316444 ~ 316703 (+)
G214809 NA non-coding downstream 128020 324536 ~ 325192 (+)
G215012 NA other downstream 319844 516360 ~ 518187 (+)
G215455 NA other downstream 887926 1084442 ~ 1086530 (+)
G215792 NA other downstream 1326753 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1413122 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1439082 1635598 ~ 1680107 (+)

Expression


Co-expression Network