LOC118944736


Basic Information

Item Value
gene id LOC118944736
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1574364 ~ 1575575 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040037.1
CAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGATATAAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTAGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGACCTGGGGGATATCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGAAATCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGATATCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGATATCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTAGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTAGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTAATGTCAAGCAGGTAACACAACTCAGTCCTAGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTAGGGGACGTCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGATATCAATGCTATTGTCAAGCAGGTAACACAACTCAGTCCTGGGGGACGTCAATGCTATTGTCAAGCAGGCATCTAATATGTGCCCCATatctgtatgttactgtattgcTGGGTCCTGGTGGTATGCACAGTGGtctgtatttacagtgcatttaaCAAGTCTCAATAca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040037.1 True 1061 mRNA 0.48 2 1574364 1575575

Neighbor

gene id symbol gene type direction distance location
LOC118964345 NA coding downstream 693333 879000 ~ 881031 (-)
irx2a irx2 coding downstream 1059155 510967 ~ 515209 (-)
LOC118944729 NA coding downstream 1323816 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 1418793 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 1499811 63916 ~ 74553 (-)
LOC118944735 LOC106595845 coding upstream 7541 1583116 ~ 1593615 (-)
LOC118944737 NA coding upstream 31466 1607041 ~ 1609598 (-)
LOC110519742 LOC106595845 coding upstream 86085 1661660 ~ 1673583 (-)
LOC118944740 LOC106595845 coding upstream 164386 1739961 ~ 1750262 (-)
LOC118944751 LOC106595628 coding upstream 174844 1750419 ~ 1755795 (-)
G215806 NA non-coding downstream 40438 1523294 ~ 1533926 (-)
G215807 NA non-coding downstream 43374 1521400 ~ 1530990 (-)
G215804 NA non-coding downstream 56159 1491111 ~ 1518205 (-)
G215805 NA non-coding downstream 79801 1491957 ~ 1494563 (-)
G215790 NA non-coding downstream 85578 1488532 ~ 1488786 (-)
G215813 NA non-coding upstream 6405 1581980 ~ 1582274 (-)
G215946 NA non-coding upstream 19743 1595318 ~ 1676448 (-)
G215951 LOC100136727 non-coding upstream 55206 1630781 ~ 1642993 (-)
G215954 NA non-coding upstream 69579 1645154 ~ 1719959 (-)
G215354 NA other downstream 654691 915959 ~ 919673 (-)
G214982 NA other downstream 1092755 481047 ~ 481609 (-)
G214663 NA other downstream 1394773 177723 ~ 179591 (-)
G215950 NA other upstream 24651 1600226 ~ 1618140 (-)
G215956 NA other upstream 83505 1659080 ~ 1682022 (-)
LOC110516567 LOC106595628 other upstream 351169 1916571 ~ 1953363 (-)
G216038 NA other upstream 482340 2057915 ~ 2058429 (-)

Expression


Co-expression Network