LOC118944737


Basic Information

Item Value
gene id LOC118944737
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1607041 ~ 1609598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040038.1
gagttgttacgttcagatagaaatagaccatgtagaacatatgttgattcttatcaagttggtgggcaggcaatcttttctactccatatattgcatttatatctgtAATGATTAACCCTAATGGTCTCAGATCAGCATTAGAAAGAAGTAGGCCTAATTATTTTAGGTGTAATCTTCAAAGATATTAGGGGGAAATAAACACTGTACCCAAATCCACGTTTTACAATGCTCCTGGGAAATGGGTAGGCCTCCACCTatagtccttcacagttttacagctgtgatatatttatttatttacatagatcacatacataaataaatatgttAGCTGTAGGTAGCGTTGAGATAAAATTCCCATATTCTATTGCTACTAACATAAATCCTAATATATCATGTTTTCCTCATTTGCTCTGTAGGAGGTTCGTCATATGAAGGACATTCAAGTGGATGTGACCCCTAACCTGCAATAGGGGCTCAGTGAGGTGACAGACATCCTGTAATGGATCTCCAGCTAGTGTCTGAGGACCTGGAGAAGGCTGTGTCTACAGCTGTGGGGCAGGACAAGCATGGGACAGACATCCTGAACGACTCTGATGTCAGAGCTCCCATCAGCCCTCTACACCTCGCTGAACCTCCGATGTTGATGCTGGGCGGGAGCAAAAATGGGCTCCCGATTGAAAGACTCTGGTCTACTTTAGAGGTCTAGCACTGTATTTCTGTTCAGGCGTACCACGGGTCTACTCTAGGACATTGATTATATTAAGAGTGAATATCTATTCAGGCGTACCACAGTCACCACCATGCTATGGAGGTCCTGGTTCAGTCTCTGCTGGATCTAGACGTGAGGGACAGCCAGGGGCGCACCCCTCTGGACCTGGCTGCCTTAAAAAGCCATGTGGAGTGTGTTGACGTCCTCATCAACCAGGAAGCCTCCATCCTGGTTAAAGACTTCACTCTGAAGAGGACCCCCATCCACGCTGCAGGtagacatttattttttatttt

Function

NR:

description
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040038.1 True 1009 mRNA 0.44 3 1607041 1609598

Neighbor

gene id symbol gene type direction distance location
LOC118944735 LOC106595845 coding downstream 13426 1583116 ~ 1593615 (-)
LOC118936608 hacl1 coding downstream 25339 1571677 ~ 1581702 (-)
LOC118944736 NA coding downstream 31466 1574364 ~ 1575575 (-)
LOC118964345 NA coding downstream 726010 879000 ~ 881031 (-)
irx2a irx2 coding downstream 1091832 510967 ~ 515209 (-)
LOC110519742 LOC106595845 coding upstream 52062 1661660 ~ 1673583 (-)
LOC118944740 LOC106595845 coding upstream 130363 1739961 ~ 1750262 (-)
LOC118944751 LOC106595628 coding upstream 140821 1750419 ~ 1755795 (-)
LOC110515047 LOC106595845 coding upstream 296539 1906137 ~ 1910903 (-)
LOC110516567 LOC106595628 coding upstream 306973 1916571 ~ 1953363 (-)
G215813 NA non-coding downstream 24767 1581980 ~ 1582274 (-)
G215806 NA non-coding downstream 73115 1523294 ~ 1533926 (-)
G215807 NA non-coding downstream 76051 1521400 ~ 1530990 (-)
G215805 NA non-coding downstream 112478 1491957 ~ 1494563 (-)
G215951 LOC100136727 non-coding upstream 21183 1630781 ~ 1642993 (-)
G215954 NA non-coding upstream 35556 1645154 ~ 1719959 (-)
G215963 LOC100136727 non-coding upstream 80808 1690406 ~ 1716788 (-)
G215354 NA other downstream 687368 915959 ~ 919673 (-)
G214982 NA other downstream 1125432 481047 ~ 481609 (-)
G214663 NA other downstream 1427450 177723 ~ 179591 (-)
LOC118964342 NA other downstream 1532490 63916 ~ 74553 (-)
G215956 NA other upstream 49482 1659080 ~ 1682022 (-)
G216038 NA other upstream 448317 2057915 ~ 2058429 (-)
G216066 NA other upstream 511605 2121203 ~ 2121857 (-)

Expression


Co-expression Network