LOC118944751 (LOC106595628)


Basic Information

Item Value
gene id LOC118944751
gene name LOC106595628
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1750419 ~ 1755795 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965470.1
TCAGCAGTAGAAAGAAGTAGGCCTAATTATTTTAGGTGTAATCTTCAAAGATATTAGGGGGAAATAAACACTGCACCCAAATCCACGTTTTACAATGCTCCTGGGAAATGGGTAGGCCTCCACCTatagtccttcacagttttacagctgtgatatatttatttatttacatagatcacatacataaataaatatgttAGCTGTAGGTAGCGTTGAGATAAAATTCCCATATTCTATTGCTACTAACATAAATCCTAATATATCATGTTTTCCTCATTTGCTCTGTAGGAGGTTCGTCATATGAAGGACATTCAAGTGGATGTGACCCCTAACCTGCAATAGGGGCTCAGTGAGGTGACAGACATCCTGTAATGGATCTCCAGCTAGTGTCTGAGGACCTGGAGAAGGCTGTGTCTACAGCTGTGGGGCAGGACAAGCATGGGACAGACATCCTGAACGACTCTGATGTCAGAGCTCCCATCAGCCCTCTACACCTCGCTGCGTACCACAGTCACCACCATGCTATGGAGGTCCTGGTTCAGTCTCTGCTGGATCTAGACGTGAGGGACAGCCAGGGGCGCACCCCTCTGGACCTGGCTGCCTTAAAAAGATATGTGGAGTGTGTTGACGTCCTCATCAACCAGGAAGCCTCCATCCTGGTTAAAGACTTCACTCTGAAGAGGACCCCCATCCACGCTGCAGGTAGACATAAGGATATCACATAGAGCTTCTGTAATTAAAACGTTTTCCTGACCAAGATGGCCATTTGTTTGGTCATGTTGCTAGGATGACAATGTCCACTCTAGGGATGTTACATGGTATCGTGTGAAAATGCCcactagacactgatctaaggtcctTTTTTGTCATGTTCTCCACTAATGATTGAGGATCTagggagggtaagctgatcctagatcagtgcaCAGGGGAGACTTCTATCCAGAGCCAGGTACACAGCTAGCAGGTGACAGGCTTCGATGGCCTCAGCCCCAAAATTCATtattatctgctgtgttaacaTCATGAGGATGTCATCTACCAACACCACTGTTCTTGAAATCTGTCTGTTCATGTGAAGGTTATAGTCATCCAGCAATCTGCTCATATCCTCTCTGTTTATCCTCCTCTAGCTACCAATAGTCAATCATCTGACATTCTTAAATCCTCTCTGTTTATCCTCCTCTAGCTACCAATGGTCAATCATCTCACATTCTTATATCTTCTCAGTTTTTCCACCTCTAGCTACTGAAGGTCAATCATCTCACATTCTTAtatcctctctgtttatcttcCTCTAGCAACCAACGGTCATTCGGAGTGTTTGCGTTTGCTGATTGGAAATGCTGACCTCCAGAGTGCAGCGGACATTCAAGACGGGAATAGTCACTTGGGTTTTGGATACAATTCCTGAAATAAAGAGATTTTGAAACtggggctgcatcccaaatggcaacctataccCTACTTGGTACAGTACTTTAAACCAAAGTCCTATGGGCTCAGGTCAAGAGTAGtgtaccatatagggaataggttgccatttgggactcagcctggTTATTACCAGTTTGTAATATGACCTGTTGTCTTGTGTATCAGAACCCCTCTGACGCTGTCGGTGCTGAGCGGACACACAGACTGTGTGTACTCACTGTTTCAACAAGGGAGCCAGCGTAGAAGCCAAAGACAAATGGCACAGAACAGCTCTACACAGAAGGGTTGCGAGGAGAGTTGGCTGTACGCgctcacacacagaaagagagggggaggcttGTTCTGATCTAGGGATGGGGCCATTGAACTACTAGGGATGGCTTTGGTGTGGGATCTAGCATGGAATATGAATTATGCCCAAATATACCTATTATGATTCCTTATTATTTAATTGATTATAAATTATTCAAATCCATTCttgcctcccctcccttcccttcctcctaGGCGGTGACGGGTCACGAGGAGTGCAGCACAGCGCCAGCTTCCTGGTTCGGGAAGGTAAGGTGCGGAGCCATGTCCACCTGGTGGCGTTGTCCGGACACATCGGGGTGCTGGGGTGGCTCCTACACACCGCCCAGTCAGTGTGGACCCTCCCCGTCATCACAGACAACCAGGGCTACACGCCACTACACTGGGCCTGCTACAACGGTACGtactggacagagggacagcgaAGTGGGCCAGAGgccacaaacaaatacacacataaacacagcgTTGCTTAAATCACCACAGCCAGCTTCGGGAGGGCAGGAACCAAGCCATCCGCACAGGAACCTTAAGAGTCcctcagacagtgagagagaagagggagggatagggggaagcACAACAGGCCCACACTCATCCTCTCGTACCACCAGGTTCCCTTCCAGCAGATACTGGACTTCAGAGGAACTGCTGCTGCTATACCCCATCTTTACCTTTACCCACAAAGGTCCTAAACGGTAGAAACCTGCGTTTCGGCATTTTCAAAACCTGTTTTGAGTATAGAAATTGGGCTGAGTGTTTGTGCTGAGAAAAGACATAAGGAGTGATGTTTCATTTAAGTTTCATGAGAGTGATTGTCATGTTTATCCGCACACTAAGACAGTCAGAACTTACCTAGCCTCTTGTCTGTAATCCATGTGGGAGGAGGGGAAATCATACATTTTGTATGAACAAATATTTTTATAAAATCATTCATGTCTTAAGAAAATTGTACCATTAAAAAATTGTACCATTTGCTCTGATGAGTAATTGTAAAGATttaatgcatcccaaatggaaccctatactgaatagtacactactgttgaacagggtccatagggttctggtcaaaagcagtgccatttaggatgctgGTATGTGAGCAACACGACTATTTGAAGGGACCTATTACATTATTAAACCTACCTGTCCTTTGGCCTCTAGAAAGTATTTTAGAAAGTTAATAATTAATTCATGTTTTCTTTCTTGTGATATTTGTCATTTTGTGCCTTTGTTAGTTACTGAGGGGAGGTTAGGAGAGTAGGGGCACCTGTATGAGCGACAACAATGATGCACACTAAGTACTACAACGTTTGTGAAAAGCACTGATACTATCCAGAGGCATGTGAGGTGGAAAACATGTCTCCCTTGGAGAGGAGAAACATTGTAAACCAATGGTAGGACAGCAGCATTTAGATTTTCTTCTGTTGGAAAATAAATATCGATATTATTTGTCTTTGGTCTTATAATCAATGTTTTTTAACAGGTGTTGCTTGCTTTAACTTCTTCAAAAAATGAAACCACTCAATCCTTGTATGTGATTGAATGTTCATATCCCCGTTTTTGTCTCTTTTTGAAAATCATTTTAACTGGAAATATGTGCAATACATTTGCTATGTTCACCAAATCAGCAACAAGAGAGTCACAGGTTCACAGGTTTTTCGTGTCATTATCATTCTTTTAAACGGATGAAACTAGCATGTACATATGAAATGGTGACTGAATTCGAAACTCCCATGAATTCTTTCAGTATCTGAAGTTTGCTGTATATTTTATGAGTAATAAATGTTATTTAATGATGAA
>XR_005040050.1
TCAGCAGTAGAAAGAAGTAGGCCTAATTATTTTAGGTGTAATCTTCAAAGATATTAGGGGGAAATAAACACTGCACCCAAATCCACGTTTTACAATGCTCCTGGGAAATGGGTAGGCCTCCACCTatagtccttcacagttttacagctgtgatatatttatttatttacatagatcacatacataaataaatatgttAGCTGTAGGTAGCGTTGAGATAAAATTCCCATATTCTATTGCTACTAACATAAATCCTAATATATCATGTTTTCCTCATTTGCTCTGTAGGAGGTTCGTCATATGAAGGACATTCAAGTGGATGTGACCCCTAACCTGCAATAGGGGCTCAGTGAGGTGACAGACATCCTGTAATGGATCTCCAGCTAGTGTCTGAGGACCTGGAGAAGGCTGTGTCTACAGCTGTGGGGCAGGACAAGCATGGGACAGACATCCTGAACGACTCTGATGTCAGAGCTCCCATCAGCCCTCTACACCTCGCTGAACCTCCGATGTTGATGCTGGGCGGGAGCAAAAATGGGCTCCCGATTGAAAGACTCTGGTCTACTTTAGAGGTCTAGCACTGTATTTCTGTTCAGGCGTACCACGGGTCTACTCTAGGACATTGATTATATTAAGAGTGAATATCTATTCAGGCGTACCACAGTCACCACCATGCTATGGAGGTCCTGGTTCAGTCTCTGCTGGATCTAGACGTGAGGGACAGCCAGGGGCGCACCCCTCTGGACCTGGCTGCCTTAAAAAGATATGTGGAGTGTGTTGACGTCCTCATCAACCAGGAAGCCTCCATCCTGGTTAAAGACTTCACTCTGAAGAGGACCCCCATCCACGCTGCAGGTAGACATAAGGATATCACATAGAGCTTCTGTAATTAAAACGTTTTCCTGACCAAGATGGCCATTTGTTTGGTCATGTTGCTAGGATGACAATGTCCACTCTAGGGATGTTACATGGTATCGTGTGAAAATGCCcactagacactgatctaaggtcctTTTTTGTCATGTTCTCCACTAATGATTGAGGATCTagggagggtaagctgatcctagatcagtgcaCAGGGGAGACTTCTATCCAGAGCCAGGTACACAGCTAGCAGGTGACAGGCTTCGATGGCCTCAGCCCCAAAATTCATtattatctgctgtgttaacaTCATGAGGATGTCATCTACCAACACCACTGTTCTTGAAATCTGTCTGTTCATGTGAAGGTTATAGTCATCCAGCAATCTGCTCATATCCTCTCTGTTTATCCTCCTCTAGCTACCAATAGTCAATCATCTGACATTCTTAAATCCTCTCTGTTTATCCTCCTCTAGCTACCAATGGTCAATCATCTCACATTCTTATATCTTCTCAGTTTTTCCACCTCTAGCTACTGAAGGTCAATCATCTCACATTCTTAtatcctctctgtttatcttcCTCTAGCAACCAACGGTCATTCGGAGTGTTTGCGTTTGCTGATTGGAAATGCTGACCTCCAGAGTGCAGCGGACATTCAAGACGGGAATAGTCACTTGGGTTTTGGATACAATTCCTGAAATAAAGAGATTTTGAAACtggggctgcatcccaaatggcaacctataccCTACTTGGTACAGTACTTTAAACCAAAGTCCTATGGGCTCAGGTCAAGAGTAGtgtaccatatagggaataggttgccatttgggactcagcctggTTATTACCAGTTTGTAATATGACCTGTTGTCTTGTGTATCAGAACCCCTCTGACGCTGTCGGTGCTGAGCGGACACACAGACTGTGTGTACTCACTGTTTCAACAAGGGAGCCAGCGTAGAAGCCAAAGACAAATGGCACAGAACAGCTCTACACAGAAGGGTTGCGAGGAGAGTTGGCTGTACGCgctcacacacagaaagagagggggaggcttGTTCTGATCTAGGGATGGGGCCATTGAACTACTAGGGATGGCTTTGGTGTGGGATCTAGCATGGAATATGAATTATGCCCAAATATACCTATTATGATTCCTTATTATTTAATTGATTATAAATTATTCAAATCCATTCttgcctcccctcccttcccttcctcctaGGCGGTGACGGGTCACGAGGAGTGCAGCACAGCGCCAGCTTCCTGGTTCGGGAAGGTAAGGTGCGGAGCCATGTCCACCTGGTGGCGTTGTCCGGACACATCGGGGTGCTGGGGTGGCTCCTACACACCGCCCAGTCAGTGTGGACCCTCCCCGTCATCACAGACAACCAGGGCTACACGCCACTACACTGGGCCTGCTACAACGGTACGtactggacagagggacagcgaAGTGGGCCAGAGgccacaaacaaatacacacataaacacagcgTTGCTTAAATCACCACAGCCAGCTTCGGGAGGGCAGGAACCAAGCCATCCGCACAGGAACCTTAAGAGTCcctcagacagtgagagagaagagggagggatagggggaagcACAACAGGCCCACACTCATCCTCTCGTACCACCAGGTTCCCTTCCAGCAGATACTGGACTTCAGAGGAACTGCTGCTGCTATACCCCATCTTTACCTTTACCCACAAAGGTCCTAAACGGTAGAAACCTGCGTTTCGGCATTTTCAAAACCTGTTTTGAGTATAGAAATTGGGCTGAGTGTTTGTGCTGAGAAAAGACATAAGGAGTGATGTTTCATTTAAGTTTCATGAGAGTGATTGTCATGTTTATCCGCACACTAAGACAGTCAGAACTTACCTAGCCTCTTGTCTGTAATCCATGTGGGAGGAGGGGAAATCATACATTTTGTATGAACAAATATTTTTATAAAATCATTCATGTCTTAAGAAAATTGTACCATTAAAAAATTGTACCATTTGCTCTGATGAGTAATTGTAAAGATttaatgcatcccaaatggaaccctatactgaatagtacactactgttgaacagggtccatagggttctggtcaaaagcagtgccatttaggatgctgGTATGTGAGCAACACGACTATTTGAAGGGACCTATTACATTATTAAACCTACCTGTCCTTTGGCCTCTAGAAAGTATTTTAGAAAGTTAATAATTAATTCATGTTTTCTTTCTTGTGATATTTGTCATTTTGTGCCTTTGTTAGTTACTGAGGGGAGGTTAGGAGAGTAGGGGCACCTGTATGAGCGACAACAATGATGCACACTAAGTACTACAACGTTTGTGAAAAGCACTGATACTATCCAGAGGCATGTGAGGTGGAAAACATGTCTCCCTTGGAGAGGAGAAACATTGTAAACCAATGGTAGGACAGCAGCATTTAGATTTTCTTCTGTTGGAAAATAAATATCGATATTATTTGTCTTTGGTCTTATAATCAATGTTTTTTAACAGGTGTTGCTTGCTTTAACTTCTTCAAAAAATGAAACCACTCAATCCTTGTATGTGATTGAATGTTCATATCCCCGTTTTTGTCTCTTTTTGAAAATCATTTTAACTGGAAATATGTGCAATACATTTGCTATGTTCACCAAATCAGCAACAAGAGAGTCACAGGTTCACAGGTTTTTCGTGTCATTATCATTCTTTTAAACGGATGAAACTAGCATGTACATATGAAATGGTGACTGAATTCGAAACTCCCATGAATTCTTTCAGTATCTGAAGTTTGCTGTATATTTTATGAGTAATAAATGTTATTTAATGATGAA

Function

NR:

description
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965470.1 False 3555 mRNA 0.44 3 1750419 1755795
XR_005040050.1 True 3708 mRNA 0.44 3 1750419 1755795

Neighbor

gene id symbol gene type direction distance location
LOC118944740 LOC106595845 coding downstream 157 1739961 ~ 1750262 (-)
LOC110519742 LOC106595845 coding downstream 76836 1661660 ~ 1673583 (-)
LOC118944737 NA coding downstream 140821 1607041 ~ 1609598 (-)
LOC118944735 LOC106595845 coding downstream 156804 1583116 ~ 1593615 (-)
LOC118936608 hacl1 coding downstream 168717 1571677 ~ 1581702 (-)
LOC110515047 LOC106595845 coding upstream 150342 1906137 ~ 1910903 (-)
LOC110516567 LOC106595628 coding upstream 160776 1916571 ~ 1953363 (-)
LOC118944769 NA coding upstream 418463 2174258 ~ 2190541 (-)
LOC118936266 twist1 coding upstream 438002 2193797 ~ 2195426 (-)
LOC118944471 LOC106573719 coding upstream 470023 2225818 ~ 2229438 (-)
G215954 NA non-coding downstream 30460 1645154 ~ 1719959 (-)
G215963 LOC100136727 non-coding downstream 33631 1690406 ~ 1716788 (-)
G215946 NA non-coding downstream 73971 1595318 ~ 1676448 (-)
G215972 NA non-coding upstream 19205 1775000 ~ 1806023 (-)
G215973 NA non-coding upstream 35152 1790947 ~ 1814787 (-)
G215985 NA non-coding upstream 185433 1941228 ~ 1941675 (-)
G216026 NA non-coding upstream 269932 2025727 ~ 2025938 (-)
G216027 NA non-coding upstream 270452 2026247 ~ 2026792 (-)
G215956 NA other downstream 68397 1659080 ~ 1682022 (-)
G215950 NA other downstream 132279 1600226 ~ 1618140 (-)
G215354 NA other downstream 830746 915959 ~ 919673 (-)
G214982 NA other downstream 1268810 481047 ~ 481609 (-)
G216038 NA other upstream 302120 2057915 ~ 2058429 (-)
G216066 NA other upstream 365408 2121203 ~ 2121857 (-)
G216059 NA other upstream 368381 2124176 ~ 2125352 (-)
G216811 NA other upstream 981066 2736861 ~ 2738467 (-)

Expression


Co-expression Network