LOC110520733 (LOC106605973)


Basic Information

Item Value
gene id LOC110520733
gene name LOC106605973
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3459132 ~ 3491968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965917.1
TTCTGTTCCACCACGCCACATTCTTACGCATACAGTCAATACGGAACTGTTGTCTGCTGTCCACTACAACTACAGTATTCATACAGTTATTGACATATCGCGTTTTGCAATCCCAACTTCCTCTTGCTCTCTATGACAGTGTGATGTTTGGCAATAGTGGGCATGTGTTATAGCTGCCTGCAAAGTAGGCTAGACGTCAAATGAATCTAGAGCTCTGAAGATCGGCGATATCATGGAAGAAACAGGGGCCCTTATCCGCAAAAGAAGAGCCACTATATCCACTGGAAAAGGTGTTCCTTTGAAACAAGTGAATGGGCGGTCAGAAGTTGATGAAAGTGTTAACGGCCGCAGTGACAGCGGCAACACTGTAACTAAGCGAAACGTGTCCGATTTGCCTTCTACCACGTCAAAAGAAAGGAAGAAACGAATAAATGTTCCTAGTGATAGACAGAGTTGCCACAGGTTGCAGGAGTCCCTGTTGAGCTCTGCCAGTGGTTATAGAAACTACAGAGGAGTCCTCAACTGGTGTGTTGTCATGCTGGTCTTAAGCAATGCCCGTCTGTTCTTGGAAAACCTTTTGAAGTATGGCATTCTAGTGGACCCAATACAAGTGGTTTCTCTATTCATAAAGGACCCCTACAACATGCCTGCAGCGTGCCTTGTTATCGtgtCCAACGTGTTTATTGTGGCAGCTTTGTACACAGAACGAAGGCTCTCAGTGGGCTGCATCAGTGAACGTGTTGGGCTGCTGGTTCATTCCATTAACCTGTCAGTCACACTGTGCTTCCCGGTGACTATCGTACTAATGGTGAAGTCCATTACTCCAGTGGGTGGAGCGTCTGCTCTGGGAGTGTACACCGTCCTCTTCCTGAAGCTCTACTCCTACAAAGATGTGAACAAGTGGTGTAGAGAGATGAGCCATGCTAAAGCCCGTAGCCTGGCCCGCTCCCTCTCATGTTCCTCTATACCGCGGTCTAGGGAAAGTGGACAGGATTATCAGGTCTCCTATCCTGGAAATGTCACCCTCAGAGATTTGTATTATTTTGTTTTTGCACCAACCCTCTGCTATGAATTAAACTTCCCCCGGTCTCCACGGATTCGAATGAGCTTCCTGCTAAGGAGGCTTTTTGAGATGCTGTTCTTCACCCAgttattggtgggattaacacaGCAGTGGATGATACCCATTATTCAGAGTTCTATGAAGCCATTGGAGGATATGGACCTGCCTATGATGATGGAGCGTCTACTCAGACTAGCCGTGCCCAATCATCTTCTCTGGTTGATATTCTTCTACTGGTTCTTCCACTCGTCCTTGAACTTTATTGCTGAGCTCCTGCAATTTGGAGACCGAGAGTTTTACAGAGACTGGTGGAACTCTGAGACCATCACATACTTTTGGCAAAACTGGAATATTCCAGTACACAAATGGTGCCTTCGcCACTTCTACAAGCCCCTGCTGAAGAGTGGAGTCAGTAAGTGGCTCGGCCAATCAGCAGTGTTCCTGGCTTCAGCCTTCTTTCATGAGTACCTGGTCAGTGTTCCACTGAAGATGTTGAGGCCATGGGCTTTTATGGGCATGATGGCTCAGCTTCCGCTGGCCTGGTTTGTGGCGCGTTTTCTCCGAGGTAACTATGGCAACGCAGCCGTATGGCTCTCTCTCATCATTGGCCAGCCAATCGCCGTGCTCATGTACGTCCACGACTACTATGTACTTCACTACAGAGAGGGGTCAGCGGGAGGTGGACCTGAATGACCTCCTCAGGGGAATATATACCAGACCAGCCTTTTATAGGAAAGACAAATAGAGCTAGAAATGTACTGTATGCTACTTTATGGAAGCACCTTAAAGGGGCCATCAGcatttgctacatccatttttggactcatACATTAATGATATATGTACCCATCGATTCTTGAGGaacataacttataaatgcctcaccAGCTTAGTTCGACTGTCGTTCCCCATCACAAACCAAAATATAGGAttgttttactccaatatttgtaaacaaatcaaatgtaaacagacactatatagcctcaaaacatggttaaaactatacttGTTTTTAATCATGGATGGTCAATCGTTGCATCCATATCTCTGTCCATGAATTTGAAAGTGATTccatttctccagtcccatccctcagctttttactgaacCAGGGGTGGGGAGgcagctttgttattgtttcaactgctgattgccactttaaaGATAACACACTTGTTATAGAAACAATCCATTTAGTTAGTGAATATTAGAATATGCCTTATTGAAACATGTCTGACAAGTGCAATTTTCAAAAAGTGCCAGTTTCTCAGAAAATGTACACAACAATGACATGTGTGTTTGTAAGATTTATGTGTATTTATGCCACTCAAGCCTCAATATTTTGTCATCTTGTTTTACTTGGGTACGTATAGAGGGATATGTATAGATACGAAAATGGCAGCTGTTGATTCTTGACTTTATTCCATTAATTGGGTCATTATTATGTTGCCGACAGAACTACATGGACAAGTAAATATATTTCTCTA

Function

NR:

description
PREDICTED: diacylglycerol O-acyltransferase 1-like

GO: NA

KEGG:

id description
K11155 DGAT1; diacylglycerol O-acyltransferase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965917.1 True 2553 mRNA 0.44 17 3459132 3491968

Neighbor

gene id symbol gene type direction distance location
LOC110506902 LOC106573706 coding upstream 145660 3310514 ~ 3313472 (+)
LOC110506857 mroh1 coding upstream 216921 3202424 ~ 3242211 (+)
LOC110506827 LOC106573691 coding upstream 329075 3125511 ~ 3130057 (+)
LOC110518590 LOC106605982 coding upstream 368114 3081967 ~ 3091018 (+)
LOC110506718 LOC102207154 coding upstream 437465 3017105 ~ 3022686 (+)
LOC110520734 LOC106605972 coding downstream 2148 3494116 ~ 3507117 (+)
LOC118936611 LOC106573422 coding downstream 15640 3507608 ~ 3533097 (+)
LOC110520752 LOC106606080 coding downstream 42551 3534519 ~ 3556267 (+)
LOC110520760 LOC106606028 coding downstream 66312 3558280 ~ 3707777 (+)
LOC110507370 LOC106606027 coding downstream 233986 3725954 ~ 3733696 (+)
G217081 NA non-coding upstream 90235 3368331 ~ 3368897 (+)
G217079 NA non-coding upstream 92919 3365829 ~ 3366213 (+)
G217074 NA non-coding upstream 97942 3360859 ~ 3361190 (+)
G217072 NA non-coding upstream 99630 3359030 ~ 3359502 (+)
G217071 NA non-coding upstream 100474 3358302 ~ 3358658 (+)
G217220 NA non-coding downstream 194628 3686596 ~ 3688096 (+)
G217223 NA non-coding downstream 218829 3710797 ~ 3711204 (+)
LOC110493965 LOC106573899 non-coding downstream 258502 3738335 ~ 3754296 (+)
G217244 NA non-coding downstream 307953 3799921 ~ 3802530 (+)
G216673 NA other upstream 350899 3106354 ~ 3108233 (+)
G216640 LOC106606088 other upstream 417615 3039986 ~ 3041517 (+)
G216438 NA other upstream 884233 2572395 ~ 2574899 (+)
G216353 NA other upstream 996388 2461217 ~ 2462744 (+)
G217809 LOC106593792 other downstream 650675 4142643 ~ 4143089 (+)
G217870 NA other downstream 805588 4297556 ~ 4302856 (+)
G217896 NA other downstream 959786 4451754 ~ 4452556 (+)

Expression


Co-expression Network