LOC110507312 (LOC106595913)


Basic Information

Item Value
gene id LOC110507312
gene name LOC106595913
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3621822 ~ 3625100 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966049.1
GCCAATCACATAATCCGTTGTTCACTTCTGTTCCAGTACAGTAAGTTCCAACACACACCCTTATCTCTGCAAACatctgcatcacacacacacacacacacagtcaggcaggcaacagagacagagagcaacacagagagaaggaaaacACTAAAGATACATAGGCTGGAACAATGGAGATGTGTAGTAGCGTGGTGTTGGGAGGCCTGGTGTTGTTGCTTCTACTGTGGTTGTTCAggctgaggagacagagacatgtcCATCTACCCCCAGGACCCTGCGCCCTGCCGCTTCTAGGAAACCTGCTTCAGATTGACAAACAGGCCCCCTTCAAGACCCTCACCAAGTGGAGTGGTGTGTATGGGCCAGTGATGACAGTGTATCTTGGGTCCCAGCGAGCCGTGGTGCTGGTGGGGTACGGGGCAGTCAAGGAGGCTCTGGTGGACCAGGCTGAGGATTTCACAGGACGAGCTCCTGTCCCCTTCCTGGTCcttgttaccaggggatacggccTGGCCATCAGTAATGGGGAGCGTTGGCGCCAGCTGCGTCGTTTCACCCTGACCACACTGAGAGACTTTGGGATGGGCCGTAAGAGGATGGAGGAGTGGGTACAGGAGGAGAGCCAACACCTCATAGACAGTCTGGACGCCACTAAAGCCGTGCCCTTCGATCCTCATCCATTCCTGAGTCGCACCGTGTCCAACGTCATCTGCTCCCTGGTGTTTGGCCAGCGCTTCGGCTATGACGATGACAACTTCTTGCACTTGCTCAACATCATCTCAGCTGTACTGCGCTTTGGAAGCAGCCCCTGTGGACAGCTGTACAACATCTTCCCCTGGCTGATGGAACACCTGCCTGGTCGGCAGCAAGTTGTGTTCGGCCAGATGGACGAGTTGAGAGGCTTTGTGATGAAAAAGATCCACGAGCACCAGGAGACCATTGACCCAGGCAACCCTAGAGACTTCACAGACTGCTTCCTCACCAGACTCAACCAGGAGAAGGATGTGTCCTCCTCTGAGTTCCATTACGAGAACCTGGTGTCCACAGTGTTGGACCTCTTCCTTGCAGGAACAGAGACCACCAGCACCACTCTCAGATATGCCTTCATGCTGCTCCTCAAATACCCCAACATTCAGGAGCACGTTCAGCAGGAGATCGACACAGTGATTGGCCGACAGCGCGTCCCTCAGATGGAGGACAGGAAGTCCCTCCCCTTCACAGAAGCCGTCATCCACGAGGTGCAGCGCTTCCTGGACATCGCCCCATTGAACCTCCCGCACTATGCCACCAAGAATATCTCATTCAGAGGGTACACTATCCCTCAGGGCACCGTGATCCTTCCGATGCTGCACTCTGTTCTGAGAGACCAGGACCACTGGGCCACGCCCACAACCTTCAATCCCAATCACTTCCTTGATCAGAACGGAAACTTTCAGAAGAACCCCGCCTTCTTGGCTTTCTCTGCAGGTAAGCGTGCCTGTGTGGGAGAGTCTCTGGCTCGTATGGAAATCTTTCTGTTCCTGGTGTCTCTGCTGCAACATTTCTCCTTCTCCTGCCCTGGAGGACCTGACAGCATTGACCTCAGCCCAGAGTTCAGCAGTTTCACTAACGTGCCGCGTCACTACCAGCTCATCGCTACACCCCGCTGACCAGGAGGGGAATTGCAGCCGGACCACAGGAGGAGTAGAGatgagggaggtagggacagcacaggaggttggttccCATATGTCTGATGCCATTTCATAAGcttgttccagccattattattatgagccgttctcccctcagcagcctccactgagggACGGGTgtctatttttttgtttgtttttcatgaCAATGTGATGCGTTGTGATACTTTGTGATGTGTGTTCTTTAACAACGAATGCTTGGAGATTTTTCTGGTCAGTATAGGTGGATCAGGAGAAACTCAGGGTCCTGGGAGTGAAGTCctctttgtcctcgtcttgtcgtgtcccgtgtatatatatatttatatattttcttcgcatttctttatatat
>XM_036966054.1
CTCAGCAGCCAATCACATAATCCGTTGTTCACTTCTGTTCCAGTACAGTAAGTTCCAACACACACCCTTATCTCTGCAAACatctgcatcacacacacacacacacacagtcaggcaggcaacagagacagagagcaacacagagagaaggaaaacACTAAAGATACATAGGTGGGttaaagaagaaacaacaacaacgaaGATTAAGCTGGAACAATGGAGATGTGTAGTAGCGTGGTGTTGGGAGGCCTGGTGTTGTTGCTTCTACTGTGGTTGTTCAggctgaggagacagagacatgtcCATCTACCCCCAGGACCCTGCGCCCTGCCGCTTCTAGGAAACCTGCTTCAGATTGACAAACAGGCCCCCTTCAAGACCCTCACCAAGTGGAGTGGTGTGTATGGGCCAGTGATGACAGTGTATCTTGGGTCCCAGCGAGCCGTGGTGCTGGTGGGGTACGGGGCAGTCAAGGAGGCTCTGGTGGACCAGGCTGAGGATTTCACAGGACGAGCTCCTGTCCCCTTCCTGGTCcttgttaccaggggatacggccTGGCCATCAGTAATGGGGAGCGTTGGCGCCAGCTGCGTCGTTTCACCCTGACCACACTGAGAGACTTTGGGATGGGCCGTAAGAGGATGGAGGAGTGGGTACAGGAGGAGAGCCAACACCTCATAGACAGTCTGGACGCCACTAAAGCCGTGCCCTTCGATCCTCATCCATTCCTGAGTCGCACCGTGTCCAACGTCATCTGCTCCCTGGTGTTTGGCCAGCGCTTCGGCTATGACGATGACAACTTCTTGCACTTGCTCAACATCATCTCAGCTGTACTGCGCTTTGGAAGCAGCCCCTGTGGACAGCTGTACAACATCTTCCCCTGGCTGATGGAACACCTGCCTGGTCGGCAGCAAGTTGTGTTCGGCCAGATGGACGAGTTGAGAGGCTTTGTGATGAAAAAGATCCACGAGCACCAGGAGACCATTGACCCAGGCAACCCTAGAGACTTCACAGACTGCTTCCTCACCAGACTCAACCAGGAGAAGGATGTGTCCTCCTCTGAGTTCCATTACGAGAACCTGGTGTCCACAGTGTTGGACCTCTTCCTTGCAGGAACAGAGACCACCAGCACCACTCTCAGATATGCCTTCATGCTGCTCCTCAAATACCCCAACATTCAGGAGCACGTTCAGCAGGAGATCGACACAGTGATTGGCCGACAGCGCGTCCCTCAGATGGAGGACAGGAAGTCCCTCCCCTTCACAGAAGCCGTCATCCACGAGGTGCAGCGCTTCCTGGACATCGCCCCATTGAACCTCCCGCACTATGCCACCAAGAATATCTCATTCAGAGGGTACACTATCCCTCAGGGCACCGTGATCCTTCCGATGCTGCACTCTGTTCTGAGAGACCAGGACCACTGGGCCACGCCCACAACCTTCAATCCCAATCACTTCCTTGATCAGAACGGAAACTTTCAGAAGAACCCCGCCTTCTTGGCTTTCTCTGCAGGTAAGCGTGCCTGTGTGGGAGAGTCTCTGGCTCGTATGGAAATCTTTCTGTTCCTGGTGTCTCTGCTGCAACATTTCTCCTTCTCCTGCCCTGGAGGACCTGACAGCATTGACCTCAGCCCAGAGTTCAGCAGTTTCACTAACGTGCCGCGTCACTACCAGCTCATCGCTACACCCCGCTGACCAGGAGGGGAATTGCAGCCGGACCACAGGAGGAGTAGAGatgagggaggtagggacagcacaggaggttggttccCATATGTCTGATGCCATTTCATAAGcttgttccagccattattattatgagccgttctcccctcagcagcctccactgagggACGGGTgtctatttttttgtttgtttttcatgaCAATGTGATGCGTTGTGATACTTTGTGATGTGTGTTCTTTAACAACGAATGCTTGGAGATTTTTCTGGTCAGTATAGGTGGATCAGGAGAAACTCAGGGTCCTGGGAGTGAAGTCctctttgtcctcgtcttgtcgtgtcccgtgtatatatatatttatatattttcttcgcatttctttatatat
>XM_036966041.1
TAATCCGTTGTTCACTTCTGTTCCAGTACAGTAAGTTCCAACACACACCCTTATCTCTGCAAACatctgcatcacacacacacacacacacagtcaggcaggcaacagagacagagagcaacacagagagaaggaaaacACTAAAGATACATAGGTGGGttaaagaagaaacaacaacaacgaaGATTAAGTATGTAAACACGGTTATGTGAGCtattggatcactccaatatgGTATCCTTCCGTGCCGCAGGATACATTCCGAGTAAGGATTTTCAGGCTGGAACAATGGAGATGTGTAGTAGCGTGGTGTTGGGAGGCCTGGTGTTGTTGCTTCTACTGTGGTTGTTCAggctgaggagacagagacatgtcCATCTACCCCCAGGACCCTGCGCCCTGCCGCTTCTAGGAAACCTGCTTCAGATTGACAAACAGGCCCCCTTCAAGACCCTCACCAAGTGGAGTGGTGTGTATGGGCCAGTGATGACAGTGTATCTTGGGTCCCAGCGAGCCGTGGTGCTGGTGGGGTACGGGGCAGTCAAGGAGGCTCTGGTGGACCAGGCTGAGGATTTCACAGGACGAGCTCCTGTCCCCTTCCTGGTCcttgttaccaggggatacggccTGGCCATCAGTAATGGGGAGCGTTGGCGCCAGCTGCGTCGTTTCACCCTGACCACACTGAGAGACTTTGGGATGGGCCGTAAGAGGATGGAGGAGTGGGTACAGGAGGAGAGCCAACACCTCATAGACAGTCTGGACGCCACTAAAGCCGTGCCCTTCGATCCTCATCCATTCCTGAGTCGCACCGTGTCCAACGTCATCTGCTCCCTGGTGTTTGGCCAGCGCTTCGGCTATGACGATGACAACTTCTTGCACTTGCTCAACATCATCTCAGCTGTACTGCGCTTTGGAAGCAGCCCCTGTGGACAGCTGTACAACATCTTCCCCTGGCTGATGGAACACCTGCCTGGTCGGCAGCAAGTTGTGTTCGGCCAGATGGACGAGTTGAGAGGCTTTGTGATGAAAAAGATCCACGAGCACCAGGAGACCATTGACCCAGGCAACCCTAGAGACTTCACAGACTGCTTCCTCACCAGACTCAACCAGGAGAAGGATGTGTCCTCCTCTGAGTTCCATTACGAGAACCTGGTGTCCACAGTGTTGGACCTCTTCCTTGCAGGAACAGAGACCACCAGCACCACTCTCAGATATGCCTTCATGCTGCTCCTCAAATACCCCAACATTCAGGAGCACGTTCAGCAGGAGATCGACACAGTGATTGGCCGACAGCGCGTCCCTCAGATGGAGGACAGGAAGTCCCTCCCCTTCACAGAAGCCGTCATCCACGAGGTGCAGCGCTTCCTGGACATCGCCCCATTGAACCTCCCGCACTATGCCACCAAGAATATCTCATTCAGAGGGTACACTATCCCTCAGGGCACCGTGATCCTTCCGATGCTGCACTCTGTTCTGAGAGACCAGGACCACTGGGCCACGCCCACAACCTTCAATCCCAATCACTTCCTTGATCAGAACGGAAACTTTCAGAAGAACCCCGCCTTCTTGGCTTTCTCTGCAGGTAAGCGTGCCTGTGTGGGAGAGTCTCTGGCTCGTATGGAAATCTTTCTGTTCCTGGTGTCTCTGCTGCAACATTTCTCCTTCTCCTGCCCTGGAGGACCTGACAGCATTGACCTCAGCCCAGAGTTCAGCAGTTTCACTAACGTGCCGCGTCACTACCAGCTCATCGCTACACCCCGCTGACCAGGAGGGGAATTGCAGCCGGACCACAGGAGGAGTAGAGatgagggaggtagggacagcacaggaggttggttccCATATGTCTGATGCCATTTCATAAGcttgttccagccattattattatgagccgttctcccctcagcagcctccactgagggACGGGTgtctatttttttgtttgtttttcatgaCAATGTGATGCGTTGTGATACTTTGTGATGTGTGTTCTTTAACAACGAATGCTTGGAGATTTTTCTGGTCAGTATAGGTGGATCAGGAGAAACTCAGGGTCCTGGGAGTGAAGTCctctttgtcctcgtcttgtcgtgtcccgtgtatatatatatttatatattttcttcgcatttctttatat

Function

NR:

description
cytochrome P450 2F3-like

GO: NA

KEGG:

id description
K17685 CYP2A13; cytochrome P450 family 2 subfamily A13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966049.1 False 2030 mRNA 0.53 2 3621822 3625093
XM_036966054.1 False 2073 mRNA 0.52 2 3621822 3625100
XM_036966041.1 True 2143 mRNA 0.52 2 3621824 3625083

Neighbor

gene id symbol gene type direction distance location
LOC118944808 NA coding downstream 383803 3237475 ~ 3238019 (-)
LOC110506836 LOC106605978 coding downstream 458899 3152009 ~ 3162923 (-)
LOC118936609 LOC106605979 coding downstream 501711 3106571 ~ 3120111 (-)
LOC110506763 pon2 coding downstream 515582 3099268 ~ 3123981 (-)
LOC110520730 LOC106573659 coding downstream 523663 3091532 ~ 3098159 (-)
LOC110507329 LOC106606059 coding upstream 94600 3719700 ~ 3725695 (-)
LOC110506742 LOC106584706 coding upstream 367914 3993014 ~ 3998119 (-)
LOC110506736 LOC106584706 coding upstream 403992 4029092 ~ 4039160 (-)
LOC110505077 ulk4 coding upstream 510206 4135306 ~ 4354126 (-)
LOC118944827 cck-l coding upstream 828391 4453491 ~ 4456931 (-)
G217387 LOC108436590 non-coding downstream 74856 3545980 ~ 3546966 (-)
G217374 NA non-coding downstream 89614 3529588 ~ 3532208 (-)
G217348 NA non-coding downstream 130969 3489028 ~ 3490853 (-)
G217349 LOC106605973 non-coding downstream 137723 3481670 ~ 3484099 (-)
G217344 NA non-coding downstream 146212 3474086 ~ 3475610 (-)
G217439 NA non-coding upstream 11816 3636916 ~ 3644304 (-)
G217469 NA non-coding upstream 81854 3706954 ~ 3707763 (-)
G217539 NA non-coding upstream 212030 3837130 ~ 3837331 (-)
G217543 NA non-coding upstream 218995 3844095 ~ 3844517 (-)
G217652 NA non-coding upstream 254049 3879149 ~ 3879388 (-)
G217261 NA other downstream 283242 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 562078 3046005 ~ 3059744 (-)
G216811 NA other downstream 883355 2736861 ~ 2738467 (-)
G216059 NA other downstream 1496470 2124176 ~ 2125352 (-)
G216066 NA other downstream 1499965 2121203 ~ 2121857 (-)
G217459 NA other upstream 61302 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 813996 4439096 ~ 4440437 (-)
LOC118944829 LOC106606066 other upstream 913562 4535483 ~ 4553394 (-)
LOC118944839 LOC106573494 other upstream 1018870 4634932 ~ 4648920 (-)
G219200 NA other upstream 1145250 4770350 ~ 4772051 (-)

Expression


Co-expression Network