LOC110507551 (LOC106606051)


Basic Information

Item Value
gene id LOC110507551
gene name LOC106606051
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4555685 ~ 4563316 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966333.1
GTCACCAGCAGAGGTCATTAAACGTCCATATCAGAGCTATCGATGCTTTAGTATAGTAGTGCGATTGCTTTTGTCTGTCTGATTGCTGTGCATGGACCACTGGCTGACGTTGGACTCAAAATCTATGTAAAAAAATCCCTGCCATACTACCAATTCAGCAATGCAGTCTTTAGAAGGAGAGAATCAACACCTGTGGATGTCACAAGTCATTGATTTGATGGTGTCCAGCTAGAGCTAGCTACAGCTATGTCTGTGGCCTCGCTCCTGCGAAGTGCCATGAGAGTGGTGAACAGACATGTCGCAGCACATTTGGTCCATCAGAGAGCTCTTTCAGGGGCAGATGCTATCAATGCACTGAGACCTTTCTACTTTGCAGTGCACCCAGACTTCTTTGGCCAGCATCCCAGGGAAAGGGAAGTGAATGAAAATTCCCTCAAGAGACTCAATGGTTATTTGGAAAACCTTCAGAAACCGGGGACCCGCTCAGTCCAACCAACAAAGCTCACCTTTTATGTCAGGGAAATAAAGGAGAAGGAAGACATTCAGAAGGACGTCCTTCCTCCTGGGTTCCGTTCGGTCAGCTTCACTCTGCAGACCAAGGATGTCCTGACCACCGTAATGGATGTGTTGAAGTCCTGCAGTCTGTCCACAGAGCACATGAAGGGACTGAAGGCCAGCTCAGAGTCACCCAAGAGCCAGCAGCCAGTGGCTGGGCATGGGAACCCTTTCTACAGGCCCATCAAATGGGACAAAAGCTACTACAGCTTCACTGGCTTCAGAGACCCAGAGCAGGAGCTGAAGCAGGCCAAGAAAGTAGAGCCCACACTAAGCTTGTGGCTGAGAAACCACGAGAAGGAGGCTACGAAGAAGCAGAACGCCAGTGTCCCTCGACGGGAGGAGCTGAAGAGACTCAAGAAGGAATTGTGTCAGAAATTTGCCTTGGAAGATATTAGGTGGCAGCGAAGCTGGGGAGTGACTCACAGATGCTGTCAGCTCCAGAGTCTGAGCCGTCTCTCCCAGCAGAACCCTGAGGCTGTGCTCAACCTGCGAGGACACACTATAATATTCACTGACCAATCAGGGATGAATGCCTCGGGTCATGTGATGCTGGGAACAATGGATGTTCATCACCAATGGACAAAACTGTTTGTGAGTCTCCCAAGCTACTGTAGCCTGCTCCAGCAGACAGAGTGGCTGAAGGAGAGGATCAGCCATGTGTTGGGAGGTATTCAGGTAATTAACATAGAGAGACTGGGACCTGTACAGCCTATAGAGGAACACTGCAGCATCCTCAACACCTTCCATAAGAGACTACTGGCCCGACGCCTAGCCCTGCATCCCAGGAGCCTGCAAGGTCTGGCCATGACCCTGGAGAATGACCGCTCCAGCCCCAGCCTGCATGAGATGGGTCACTTCGTCATCCCAGCCACCTGTGAGCCCAGCAGACTACAGACTTTCCTCCAGAGCATGGCCTGGGAGGCCCGACAACGAATCAAACACAGGAACCAGTtgcagaaggaggaggaggaggtactgctccaCTGCCTGGAGGCTCTGGCCCTGAGGAATCTGTCCAAGGAGCCCAGTGTCAGACACAACCAGATGATCCCCTGCTGCAGGCGGTTGCTGGAGGAACGCTTCCCCCTCATGGAGGGCCTCCGGGTGGAGGTCTCCCACTTCTACTCTGTCATGCAGGACGGGGACTTGTGCATCCCCTGGGACTGGCAGGGCTGAGGGGACAGGGGACATGCTGCAGCACGCCTGGTTGAACCAGACTCAATGCTATGCTCACCATGTCTACCACCAAGCTACACTGCAGCTGCCACACAGAGAAACAAACCGACCGACTCTCACAAGGTCAATCACGTTATCCTTCTACTGGAGAGGACAGATAAACAGACATACTCTTTTCACACTATTGTGCTGAaccagggcccggtttcccaaaagcatcttaaggctgtGTTCATAgttagaaccttcgtaggagcATTGTTAAATCTCAGAACTGTTTTCCAAAGCCATCCTTACTAAAGTTGCACTTGAAAACGCTTGTTATTTACCACCTGCCTCAGATCACTCCTAGAACAGCTAGTGTTATTTTTCCCTTCCACTAAACATAGACTCAAGatgcttctctgtctctctgtgaccacCGATAACTTCACAACGATGTTGACTGCAAATATAGAGTTGCCAATGCCTTTGCAATCGTTAGAAACAACCAAAAGACAAAATTATGCTTAAAATGAAAACCGATATGACTGCATTCAGatataaatagcctacctacCCACATTGTAGTCTACATAGGCCTATATTTCCATTagttttatttatctatttggCTACCATCTGTAATTTCTGCCTTTATATATTTCATGATGCACTAAATCAAGATTTGACATATGTATCATAGGGTAAGCATTACAATAAGTGGCCTCAGTATTTGCAGCCGCACTAGCTGATCCGTCGTCAGTATTGTGGAATCATTATCATTTTAAGGTAAGATATTAATGAAGAAAGCTGATCCGATTTCTTTCAATCTTGTCAGTATCGACACACTTAGCGAACGTTCTGTCTGTGTGGCGTTACATCTTCTGCCATTGTAGGAAAGATGCATTGTTAAAACACTCCTAAAGCCTCCGTAAGCCTAAATTCCATCGCTATCGAGAAGCCAGGCCCAGTACTGTGCTGGCTTGCATACGTTCTTTTCATAATGTCCTTTCCAGCATGTTCCAGTAACTATGGTGGATAGGATGGGTAACCAGACCAGCTCAGCTTGGTTTAGTAGTGTGAATAGGTTTGGTCAGAGCAGGCTGGTGCAATAGAGTTAGTTTGTATTAACCAACCAGAAGGCCTAGTATCTTGAAGTCAGTCAGTGTTCAGGAAGGTGTGCGTGTGAATAAACCAACACAGAGGAATAGTATCAGTATTTTCATTAGGGGTGTATGAGGGAAAACAACATGTTTGTTAATGTAGTTCAGTGGCACTTTAGATTGAttgtgttattttaatgaacattTAGTGGAGTATTATTTCCGAGACGGTCTACGAAGACAACTATTACACTTATTCAAATCTATTACATTTGACTTTAAACTGTACAGAAACACACTTTGCTATCACAAAAGAAGAGCTAAGGAAAGAAATGGCTCGGTATTACGAGCTGTCTCATACGATGACCGGAACGGGAGACGTCATATACTGTTGCAGTGTTTAAACTCTACACTAGATGGTGTGCTCTCTCACTAAACTCAGTATGGGGTTCATTGGTTTTTGCAATGAAATATACATTTCGGAGTGAGATTTGATGTTCTGGTgtttctcagagtaggagtgcggatttaggatcagtttggcctttttagatcacaatttaaaaaaaacattacatggacaggggatTCTAGATTCTAGATCAGATGTTTGATACTTAGAGCCTCTGGTTAGTGGTCTACTGTAGCTTGATCTTGACTGAAATGAGCACCAGCTATTAGAAGAAGAGCTAAAGTACTGGAAGTGGATCCCACCACATTGATGCAGCTCTCGTGCGATGGGACAGTCAAATGGAATGAAGACTTCATACTGCCAGATCAAGTAATACTaactgcatcagttacctgactAGCTAGAATACTGTCGAGACAGCCGGGAACAATAATGATTAATATATGTTTGTTTTTACCTCTTAACTTTAACACAACAAATACCACAGAATAAAGACCTGCTAAAAGAT

Function

NR:

description
T-cell activation inhibitor, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966333.1 True 3739 mRNA 0.46 11 4555685 4563316

Neighbor

gene id symbol gene type direction distance location
LOC118944829 LOC106606066 coding downstream 2291 4535483 ~ 4553394 (-)
LOC118944827 cck-l coding downstream 98754 4453491 ~ 4456931 (-)
LOC110505077 ulk4 coding downstream 201559 4135306 ~ 4354126 (-)
LOC110506736 LOC106584706 coding downstream 516525 4029092 ~ 4039160 (-)
LOC110506742 LOC106584706 coding downstream 557566 3993014 ~ 3998119 (-)
LOC118944831 NA coding upstream 3701 4567017 ~ 4595235 (-)
LOC118944839 LOC106573494 coding upstream 71616 4634932 ~ 4648920 (-)
LOC110507598 snrk coding upstream 141223 4704539 ~ 4763137 (-)
LOC110507662 NA coding upstream 194231 4757547 ~ 4758783 (-)
plekho1b LOC106606096 coding upstream 289387 4852703 ~ 4892517 (-)
G219085 NA non-coding downstream 41028 4514354 ~ 4514657 (-)
G218083 NA non-coding downstream 62945 4492501 ~ 4492740 (-)
G218076 NA non-coding downstream 104059 4450972 ~ 4451626 (-)
G218075 LOC106605488 non-coding downstream 104782 4447883 ~ 4450903 (-)
G218022 NA non-coding downstream 213756 4341577 ~ 4341929 (-)
G219109 NA non-coding upstream 6105 4569421 ~ 4569831 (-)
G219153 NA non-coding upstream 105441 4668757 ~ 4669344 (-)
G219144 NA non-coding upstream 130658 4693974 ~ 4697023 (-)
G219201 NA non-coding upstream 205846 4769162 ~ 4770253 (-)
G218073 LOC106605488 other downstream 115248 4439096 ~ 4440437 (-)
G217459 NA other downstream 866381 3686402 ~ 3689304 (-)
G217261 NA other downstream 1217105 3338186 ~ 3338580 (-)
G216902 LOC106606079 other downstream 1495941 3046005 ~ 3059744 (-)
G219200 NA other upstream 207034 4770350 ~ 4772051 (-)
G219290 LOC106593286 other upstream 444768 5008084 ~ 5009406 (-)
G219500 NA other upstream 1124409 5687725 ~ 5688291 (-)
G219591 NA other upstream 1184842 5748158 ~ 5748714 (-)

Expression


Co-expression Network