LOC110507662


Basic Information

Item Value
gene id LOC110507662
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 4757547 ~ 4758783 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040212.1
TGTCTCGGGGCTCTGCTCCGCTGTCTCGGGGCTCTGCTCCGCTGTCTCGGGGCTCTGCTCCGCTGTCTCGGGGCTCTGCTCCGCTGTCTCGGGGCTCTGCTCCGCTGTCTCAGGGCTCTTGGCTTGCGTACTGTTACGTTTTGGTGACTCTTGTCTGGGGACAATTAGTCAGAACTCCTGGGATAGAGCctggcaaaaaaaataaaaagcatctcttctctcaccccctcGCCCTCCATTGCCTATGATTGGTGACGGAGGGCCAGGCAGAGTGAAGAccctaaatggcatcctattccctatattgtgcactacttttgatcagaatCCCATAGGGCTCtatgcacaatatagggaacagGTTGCTGTTTGAGACGCAGCCAGTGTGCAACAGATGTTTCTGTAACTGCTCAGAGAACACCAGAGGTAGCATGAGGCCAGGAATGTGAATGAGCAAGAGTCATTGTACAAAAAGAGGAAACTGTTGGGCATGTGGGTGTATGTTATGATGAACACTTTTCTTGGAATGTGaccaatgagagagagacactacagtCTACTGCCAGCCCTGTGGCTGTTTGTTGTCACTCTGCCATGTTTGTTCCTATGTAACGAGAGAACATGGTGCTGGAGGTGTCAAGGAGGATTAGGTCAGTCTGACAGAACAGGGTGCTGGAGGTGTCAAGGAGGATTAGGTCAGTCTGACAGAACAGGGTGCTGGGGGTGTCAAGGAGGATTAGGTCAGTCTGACAGAACAGGGTGCTGGAGGTGTCAAGGAGGATTAGGTCAGTCTGACAGAACAGGGTATTGTATGGGCTGTGGTGCTGGAGGTGTCAGGGAGGCCCAGTCTGAGGATGATACCACATGGTAGGGGCTATAGTAGGGTGGGATTTGGCCCAGGCATCTGATGGAACAGTTAGACTGGTGTTGGTGACCTTGTACCACTCACTCATGGTTAGACAATGTTCCTCAGAAATAACCTGTTGCATAAAAATGTTGAAAGAAAATAAAATGAGACATTTACTGTGACTATCAGCTGAGAGTATTTatattcaacctctctttgaAAGGCAACACACTGCAAATATTGTCTCCTGAAAAATCCGCTAAATGTTGTGAGAATGCTTACTATGCAATGAATGTGCAGAGCCCAGTTACAGTGAAGTGGAGGAACAGGCTTGTTTAATTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040212.1 True 1192 mRNA 0.48 2 4757547 4758783

Neighbor

gene id symbol gene type direction distance location
LOC118944839 LOC106573494 coding downstream 108627 4634932 ~ 4648920 (-)
LOC118944831 NA coding downstream 162334 4567017 ~ 4595235 (-)
LOC110507551 LOC106606051 coding downstream 194231 4555685 ~ 4563316 (-)
LOC118944829 LOC106606066 coding downstream 204153 4535483 ~ 4553394 (-)
LOC118944827 cck-l coding downstream 300616 4453491 ~ 4456931 (-)
plekho1b LOC106606096 coding upstream 93920 4852703 ~ 4892517 (-)
LOC110518085 LOC106593045 coding upstream 178646 4937429 ~ 4943500 (-)
LOC118944848 NA coding upstream 248548 5006952 ~ 5007885 (-)
LOC110507711 LOC106574107 coding upstream 284113 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 471557 5230340 ~ 5312338 (-)
G219144 NA non-coding downstream 60524 4693974 ~ 4697023 (-)
G219153 NA non-coding downstream 88203 4668757 ~ 4669344 (-)
G219109 NA non-coding downstream 187716 4569421 ~ 4569831 (-)
G219085 NA non-coding downstream 242890 4514354 ~ 4514657 (-)
G219201 NA non-coding upstream 10379 4769162 ~ 4770253 (-)
G219208 NA non-coding upstream 20224 4779007 ~ 4837111 (-)
G219236 NA non-coding upstream 139840 4898623 ~ 4898848 (-)
G219273 LOC106606069 non-coding upstream 212620 4971403 ~ 4974116 (-)
G218073 LOC106605488 other downstream 317110 4439096 ~ 4440437 (-)
G217459 NA other downstream 1068243 3686402 ~ 3689304 (-)
G217261 NA other downstream 1418967 3338186 ~ 3338580 (-)
G219200 NA other upstream 11567 4770350 ~ 4772051 (-)
G219290 LOC106593286 other upstream 249301 5008084 ~ 5009406 (-)
G219500 NA other upstream 928942 5687725 ~ 5688291 (-)
G219591 NA other upstream 989375 5748158 ~ 5748714 (-)
G219592 NA other upstream 992941 5751724 ~ 5752094 (-)

Expression


Co-expression Network