LOC118944848


Basic Information

Item Value
gene id LOC118944848
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5006952 ~ 5007885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040224.1
GTTAACGATTTTGTATGAATAAAAAGCAGTAACAATTCAACGTAACTGGAGGTGGCAATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGTCACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGATACGTGTGATTAGGTGTGCAGGATACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGATACGTGTGATTAGGTGTGCAGGATACGTGTGAT
>TU250126
CAGGATACGTGTGATTAGGTGTGCAGGATACGTGTGATTAGGTGTGCAGGATACGTGTGATTAGGTGTGCAGGATGTTGTTAGGACATATGTGATTAGGTGTGCAGGATGTTGTTAGGACATATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040224.1 False 450 mRNA 0.49 3 5007331 5007885
TU250126 True 210 lncRNA 0.50 2 5006952 5007368

Neighbor

gene id symbol gene type direction distance location
LOC110518085 LOC106593045 coding downstream 63831 4937429 ~ 4943500 (-)
plekho1b LOC106606096 coding downstream 114814 4852703 ~ 4892517 (-)
LOC110507598 snrk coding downstream 244194 4704539 ~ 4763137 (-)
LOC110507662 NA coding downstream 248548 4757547 ~ 4758783 (-)
LOC118944839 LOC106573494 coding downstream 358411 4634932 ~ 4648920 (-)
LOC110507711 LOC106574107 coding upstream 35011 5042896 ~ 5054330 (-)
LOC110534068 LOC106574842 coding upstream 222455 5230340 ~ 5312338 (-)
LOC110535324 LOC106605869 coding upstream 316239 5324124 ~ 5333624 (-)
LOC110515205 ci023 coding upstream 325988 5333873 ~ 5335574 (-)
LOC110535340 LOC106574784 coding upstream 344255 5352140 ~ 5355536 (-)
G219286 NA non-coding downstream 13724 4992919 ~ 4993607 (-)
G219284 NA non-coding downstream 15808 4991239 ~ 4991523 (-)
G219283 NA non-coding downstream 17185 4989492 ~ 4990146 (-)
G219279 NA non-coding downstream 22817 4984149 ~ 4984514 (-)
G219273 LOC106606069 non-coding downstream 33215 4971403 ~ 4974116 (-)
G219296 NA non-coding upstream 3448 5011333 ~ 5016077 (-)
G219278 LOC106606056 non-coding upstream 16539 5024424 ~ 5025192 (-)
G219276 NA non-coding upstream 17525 5025410 ~ 5026681 (-)
G219305 NA non-coding upstream 19652 5027537 ~ 5028024 (-)
G219307 NA non-coding upstream 21833 5029718 ~ 5029968 (-)
G219200 NA other downstream 235280 4770350 ~ 4772051 (-)
LOC118944829 LOC106606066 other downstream 466890 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 566894 4439096 ~ 4440437 (-)
G217459 NA other downstream 1318027 3686402 ~ 3689304 (-)
G219290 LOC106593286 other upstream 199 5008084 ~ 5009406 (-)
G219500 NA other upstream 679840 5687725 ~ 5688291 (-)
G219591 NA other upstream 740273 5748158 ~ 5748714 (-)
G219592 NA other upstream 743839 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 1321717 6329602 ~ 6349701 (-)

Expression


Co-expression Network