LOC110535324 (LOC106605869)


Basic Information

Item Value
gene id LOC110535324
gene name LOC106605869
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5324124 ~ 5333624 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966636.1
TAAAAACATCAGCTGTCAAtcacttttctttaaccaataCGTCTGGTTGTGGAGCTACATTTTTTCATAATCCACAGGGGAATAACCTACAAGTAAATGTCAAAATATTGAAAAGTTATATTAAAAGTTCCTTCTAGAATAAAACCAGACCATAGCAATCAGTGAATGTGTGCAGTGGGATCAGAGTGACAGATGTAGGTAACCTCGTCAGTCACTGCCAGCACCTTATCCCTTTATCCTCTTCAGTGGATTCTCTTGAGGGAGCAGCTGCGGTGTGTGGAATGGCCTGGCTGGAACAGACGAGGATTAAGGGGTCTTAACTAGGACCTGACTCCATTACAGGAGGTGTGCTAGTCAGGAGGAGAAATACACCAGGGAGTGGAGACTGGGAAGTGACAGGGAGAAAGGATGAGTGGTGGTGGACGGGCAAGCTCAGGACAGATCCTGGTTCTCTCATGGCTGGTCGTTGTTCCTTCTCTGTCCCAGGTTCGCCACTCTCTGCCAGTCTTGTGGATCATGCCACTGACAGACAATCCAGGGCGGGGAAACCTTACGGCGTCCTTGTTGCCAGCTGTCCAGCTCGCTCTAGACGACCTGAGCAGGCAGCAGACTCCTCTAAGAAACTATGAGATCAATTTTCACGTCATAGATTCAGAGTGTAATATTGCCAAAGGACTTAAAGCCTACTTTGATGCCATATGCTTTGGGCCAAAATACTTAATGATCTTTGGAGGTGTGTGTCCATCAGTCACATCCGTCATTGCTGAATCACTACAGGGGTGGAACCTGGTACAGCTGTCTTTCGCTGCAACAACGCCTGTTTTAGATGATGAGAAAAAATATCCCAACTTCTTCCGAATGGTCACCTCGGACAACACAGTCAATCAGGCTGTTGTGAAGATCCTACAGAACTACAAGTGGAGACGTGTAGGGACGCTGACCCAGGATGTACAGAGGATCTCAGAGATAAGGAGAGATCTGACTAAACAACTGAGCAAGGCTGATGTTATGGTTGCTGTAACTGAAAGCCTGTCCACTGACCCATGTGTCAATGTAAAGAAATTGAAGGATATGGATGTAACGATCATTATTGGGTTGTTTGACGAGAATTCAGCCTCCAAAGTATTTTGCTGTGCTTACAGCCTGAACATGTTTGGCGGGAGGTATCAGTGGATCCTCCCTGGCGGTTACCAGGGGAGCTGGTGGGAGGAGGCCAACTCCTCCAACTGTGCTTCAAACAACCTGCTGACTGCAATGGAAGGCTACATCACTGTGGACTTCACACACCTCAGTAACAGACAGATTAAAGGCATCTCAGGAAGGACCCCAGAAGAGTATGATGAGACTTACAACAGAGAGCTGCTGCAGAGAGGGTTGGTTGCCAGCAAGTTCCATGGGTTTGCCTATGATGGAGTTTGGGTGATGGTGAAAGCATTGACCAGGGTCATTGAGTCTGTTCGTCACAGAGAGAGATATGACATCCACCGGAACTTCACAGTCAGCAGCAAGGAGATTGGACAAATGGTCCTGGATTCCATGAAGGAGATTTGCTTTGAGGGTGTAACTgGTCAAGTTATGTTTAGAAATGGGGAACGCATGGGAACTATTAAATTAAGCCAATTTCAAGAGGGACGGGAGGTTAAGATAGGCCAGTATAATGCTGAAGAATTAGAACTCAACCACTTAATCAAGTTTCAAGGCATGCAGCCGCCTAAAGACCGGACACACTCCCAGCGGTGGGATGTCAGTGTTCCCCTCTACATCATCTTGTTATCCACCACTGGCCTGGCCATGCTCATGgcactcttcttcctcttcttccacaTCAAGCATCACAACCATTGGGTCATGAAGTCCAGTCCGTCCATGAACTACCTCATTATCCTGGGTACGATGCTGGCCTGTACCTCCGTCTTCCTCTATGGGCTGGATGGATCCCTTGTGACTGACAAAGTGTTTGTTATGCTTTGCCCTATTCGCACATATATTCTTTCTGTAGGATACACCACAACCTTTGGGGCATTGTTTGCGAAAACTTGGAGGGTCTGGACAATTGTCAAAAATAAGGAGATAATTGAAAAGATTATTAAGGATGACCAACTATGGATAATTGTCGGGGGAATGCTGCTAATGGATCTGTGTCTGTTAACCTGCTGGCAGATGGTGGATCCACTCAGACGAACAGTGGAAGAGTTCAGCCAAGAGACTGCTCCTGGTGGTGAAGTTAATACAAGGCACTTCCTGGAGCACTGTGAAAGTACAAACCTGACTAAATGGCTCGCCATTGTATATGGCTACAAAGGGCTTCTCATGTTTCTTGGATGTTTCCTGGCCTTGAGAACAAGGCATGCACATATCCATCTCCTCGATGACAGCAAGTACACAAGGCTGAGCATGTACCACGTGACCGTCATGTCTATCATTGGAGCATCGGGGTGCTTCCTGACCCAGTATCACCCTAATGTGCAGCTCTTCATCATGGCTTTGGTGGTGATCTCCTGCTGTACCTGCACTCTGTGTCTGGTGTTCCTGCCCAAGCTTGTAAAAATCCGAGACAATCCCAACCAAGTGGATCCAACTAGCTGGTTACAATGTGATCTTCACAAGGAGGATTCGGAGACCTCCAGTTCCTCTAGCAGTCTCAATCAGGGCAGATCTCTTGAAAGCCTGCGGACTGAAAACCAGCAGCTCTGGAGGAGAATCACAGAGATTGGTGACCAGTTGGAGGATGTCGCCATGCAAGTACTAGAGGAAGAGCTGAGTCCTCCCAGTCCACAGGGCCATGAAGTGAGACTGAGAGCCCAGGTGTGCTCTGAGGATGTGCCCAGGATGAACAGGGAACTCTTTGATGACATCAACTCACCTGAACACCTCCAACGAAGACGGTCCGTGCAGCTGCCAATTCTTCACCACGCCTACATGCCAGCCATTGGGGGAAGGACTGCCAGCTGTTCCAGCCTTCTGAGAAGTCCCGATGTCCCCAGTGCCCAACAGAGACATATGCCACCATCACATCGGGTCATGGTCACCGGGCTGTGACTGTATTTCCCTCTACAGTGAGTGACAATACGCTGGAAAAGTTACAATATTAATTGAACTGCCTCTGGTTCCACTGGCAGCTGGAAGTCAAATGACCTTCCTTTACTTGGACTGCCATAGCATCATTCACATCTGAAGTCATGTTCACGTCCAGACAAGTTCTACATGCAATGTGGTGCTGACAAAAGTTGTGTGGTAAATTACAATAGCTGCTTTCTTTATGTATTTTTAGTAGATTGATTGCAGTGCAACTCATAGAAGTTTTCTCCTgatgtaaaaacaaaacatgttGGCCGTTCCCCCTGTTCCCCAACATGGGAGTATCCTGTATTGCAGCAGGATACTGGCAGTGACTGTATTTGCACTCTTGGTAACTGCTCTGTGCTGTGGTATTGCTCTCTGGTATTGCTCTCTGGTACTGCTCTCTGgtactctgtcatgttgtcacTCTGGGAATTTCCTGGTTTGCTAAAGCCCAGGAATGAACTTTAAACTGTGTTCCAAGGCAGAAGTTAACCCTTTACAGCAGTCAAATAAATCATTGATTGTCTTTCCAAACATTGCCTGTGTCCTGGAGAAAACAACATCTTGGCTATGTCTAGGCAAATTCAAGTTTATGTTATCAGTCTTTCAAAGATGATGAATAATCGGTTTGAGAGTATAACCTTTAAAtgtgcatatttgtaaaaaaaaaaaagaaatatctaTATCAAAAAAAGTGCTACAACTATTTTGCAATCCACTGTTGTGTGCCAGACAGTACTTTCTATTTGATGTGCTGCAAGAACAAATAAGGGAGGAGTGTCTCAACTTGGGGTTTATAAAAAGGTACATCTATCTCACTGCAGAAAGTGTATTAGGTATCCACAACAACATCCTTGGGAAAAGGATCCTGCCATGTTCTCCATCAGAACCGCATTCATCCTGCCAGCTCTTCTGGCCCTTTTGGTTGTAAATGTGGAATCCTCTTTCAGTGGTGGTGGTGGAGGATCCTACAATTATGACATATCTAAAATGTCTGACCTGAGGAAGCTGTACAACTCCAAGGTGTATGAAGCAGACAGAATGCGGAGACCCCTTGAAGGCATGTCCTTTCAGGTGGGGGTTCTCAGCCACTCAGGAGTCAGAGTGACTTTGGCTGATGGCTCCCAGTGGCTTGTCCATAAAGGGGATGGATTTGGCATCAGCTCTCAGACTGTAGTGGTGGCTGCACGCCACATGGGTCGAGACTGGAAGGCAAGT

Function

NR:

description
gamma-aminobutyric acid type B receptor subunit 2-like

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966636.1 True 4281 mRNA 0.47 20 5324124 5333624

Neighbor

gene id symbol gene type direction distance location
LOC110534068 LOC106574842 coding downstream 11786 5230340 ~ 5312338 (-)
LOC110507711 LOC106574107 coding downstream 269794 5042896 ~ 5054330 (-)
LOC118944848 NA coding downstream 316239 5006952 ~ 5007885 (-)
LOC110518085 LOC106593045 coding downstream 380624 4937429 ~ 4943500 (-)
plekho1b LOC106606096 coding downstream 431607 4852703 ~ 4892517 (-)
LOC110515205 ci023 coding upstream 249 5333873 ~ 5335574 (-)
LOC110535340 LOC106574784 coding upstream 18516 5352140 ~ 5355536 (-)
LOC110535504 LOC106574737 coding upstream 42498 5376122 ~ 5439903 (-)
LOC110517595 LOC106585541 coding upstream 123902 5457526 ~ 5492523 (-)
LOC110513540 LOC106585541 coding upstream 224370 5557994 ~ 5590146 (-)
G219388 NA non-coding downstream 112481 5211348 ~ 5211643 (-)
G219387 NA non-coding downstream 114826 5208876 ~ 5209298 (-)
G219386 NA non-coding downstream 117540 5206164 ~ 5206584 (-)
G219383 NA non-coding downstream 121364 5202547 ~ 5202760 (-)
G219382 NA non-coding downstream 122082 5201830 ~ 5202042 (-)
G219450 NA non-coding upstream 4623 5338247 ~ 5338461 (-)
G219459 NA non-coding upstream 78740 5412364 ~ 5414964 (-)
G219464 NA non-coding upstream 92115 5425739 ~ 5426232 (-)
G219491 NA non-coding upstream 174417 5508041 ~ 5603177 (-)
G219494 NA non-coding upstream 183772 5517396 ~ 5611217 (-)
G219290 LOC106593286 other downstream 314718 5008084 ~ 5009406 (-)
G219200 NA other downstream 552073 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 675321 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 783683 4535483 ~ 4553394 (-)
G218073 LOC106605488 other downstream 883687 4439096 ~ 4440437 (-)
G219500 NA other upstream 354101 5687725 ~ 5688291 (-)
G219591 NA other upstream 414534 5748158 ~ 5748714 (-)
G219592 NA other upstream 418100 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 995978 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 999344 6332968 ~ 6338813 (-)

Expression


Co-expression Network