LOC110534121 (slc4a7)


Basic Information

Item Value
gene id LOC110534121
gene name slc4a7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5637262 ~ 5706145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966755.1
GTTATGCTCTGTATGTAAAAATCGCTACGTTAGGTTAGTGAAAATGCCAGTCAGTCGAGTTAGTGTCTGTGACACGTCAAAAAAGGTTATTTCGGTATTCGATATTCAAATTCTCCCAGAGGATAGGGGACAGAAATTTGGACAAATGGAAGAAGAGGCCAGTGAACAGATGCGACCCCTCTTGACATCCGGGAACGATGATGAGGCGGTGGTGGACCTGGGGAAGACTAGCTCCACCATTCACACCAACTTTGAGAAAGAGGAGCTAGAGAGTCACAGAGCGGTCTATGTGGGTGTCCATGTTCCTCTGGGCAGAGAGACCAAACGGAGGCACCACCGCAGCCACCGCGGCCACAGACACCACCGCAAGAGGAGAGACCGCTCGGACCATGAAGATGGACGAGAGTCTCCTTCCTATGACACCCCGTCCCAGCGGGTCCAGTTCATCCTGGGGAcagaggatgatgatgaagagcACATGCCCCACGACCTGTTCACTGAGCTGGACGAGCTGTTCTTCCGGGACGGACACGTCTACGAGTGGAGGGAGACAGCCAGGTGGTTAAAGTTTGAGGAAGAcgtggaggatggaggggagcGTTGGAGTAAGCCCTACGTAGCCACGCTGTCTCTCCACAGCCTCTTCGAGCTCCGCAGCTGCATCCTCAACGGCACTGTCATGTTGGACATGAGAGCTAACACCATTGAGGAGATCGCAgACATGGTGATAGACAGCATGGTGGCGTCGGCTCAGCTGGAGGAGGAGTTGAGGCAGAAGGTGAGGGAGGCCATGTTGAAGAGACACCACCACCAGAACGAGAAGAAGCTCAGCAACCGCATCCCTCTGGTGCGCTCCTTCGCTGACATCGGCAAGAAACAATCTGACCCACACCTGCTTGAGAGAAACTGCCTCCTGGCATCCCCCCAGTCAGCTCCTGGGAACCTGGAGAACAGTAAACCGAGTGAGAGCCGCATCAACggaggaagcagagagaacagcactGTGGACTTCAGCAAGGTGGACATGAACTTCATGAAGAAGATCCCTCCTGGGGCGGAGGCGTCCAACGTGCTGGTGGGAGAGGTGGAATTCCTGGAGCGACCAATCATAGCCTTCATCAGGCTGTCCCCCGCCGTGCTGCTCACTGGTCTCACTGAGGTGCCTGTACCCACCAGGTTCCTGTTCCTGCTGCTGGGTCCGTTTGGGAAGGGTCCTCAGTACCACGAGATCGGCCGCTCCATTGCCACGCTGATGACAGACGAGGTCTTCCATGATGTAGCGTACAAGGCCAAAGACCGGAACGATCTGCTGTCGGGGATAGATGAGTTTCTGGACCAGGTGACCGTCCTACCCCCAGGAGAGTGGGACCCTACAATACGAATCGAGCCCCCCAAGAGTGTCCCATCTCAGGACAAGAGGAAGATGCCCTCATTGCCCAACGGCTCTGCCCATAATGAGTCCTTCAAGGAAGACCAGCACCAAGCAGGACCAGAGCTACAGAGGACAGGGAGgatCTTTGGGGGCCTGGTGATGGATGTAAGGAGGAAAGCTCCGTTCCTGTGGGGAGATATTAGGGATGCTCTGAGCCTGCAGTGCCTGGCCTCTGTGCTGTTCCTCTACTGCGCCTGCATGTCCCCTGTCATCACTTTCGGAGGCCTGCTGGGCGAGGCCACCAAGGGAAACATTAGTGCGATCGAGTCGTTGTTCGGGGCGTCTCTGACGGGCGTGGCCTTCTCCATGTTTGCGGGCCAGCCACTCACCATCCTGGGCAGCACCGGACCAGTCCTGGTCTTTGAGAAGATCCTCTTTAAGTTCTGCAGTGACTACGACCTGTCCTACCTGTCCTTGAGGACCAGCATCGGCCTGTGGACGGCCTTCCTGTGCCTCGTCCTGGTTGCCACGGACGCCAGCTCCCTGGTCTGTTACATCACCCGCTTCACAGAGGAAGCCTTCGCAGCGCTCATCTGCATCATCTTCATCTACGAGGCCCTGGAGAAGCTGGTTCACCTGGGGGAACTCTACCCCATCAACATGAACAACAAGCTGGACAACCTTACCTTCTACATATGTCAATGTTCTCCGCCGGTTAACGCCACGCCTGAGATCCAGCAGGTCTGGAACCACAGCGGGGTCGCACCAGAATCAATATCTTGGACCCAACTGGATGTCGATGAGTGTTCTAGGCTGCGTGGGGAGTTTATTGGGCCAGCTTGCGGCCAACATGGTCCCTACATCCCTGACGTCCTCTTCTGGTCCGTCATCCTCTTCTTCACtaccttcttcctctcctccttcctcaagCAGTTCAAGACCAAGCTCTACTTTCCCACCAAGGTACGGTCGACCATCAGTGACTTCGCGGTCTTCCTGACCATCATGATCATGGTCCTGGTGGACTACCTGGTGGGCATTCCCTCCCCCAAACTGAATGTGCCTGACCGCTTTCAGCCCACGTCTGAGAACCGTGGCTGGGTGATCTCCCCGCTGGGGACCAACCCCTGGTGGACCATGCTGGCTGCAGCCATCCCTGCCCTGCTCTGCACCATCCTCATCTTCATGGACCAGCAGATCACCGCCGTCATCATCAACAGGAAGGAGCACAAACTCAAGAAAGGCTGTGGCTACCACCTGGATCTTCTGGTGGTGTCTGTGATGCTGGGGGTGTGCTCCATCATGGGCCTGCCCTGGTTTGTAGCGGCCACCGTGCTCTCCATCTCCCACGTCAACAGTCTGAAGCTGGAGTCAGAGTGCTCGGCCCCTGGGGAACAGCCCAAGTTCCTGGGGATCAGAGAGCAGAGGGTCACCAGCTTCATGATCTTCATCCTCATGGGCTGCTCTGTCTTCATGACCTCGGTGCTCAAGTTCATCCCTATGCCAGTCCTCTACGGGGTGTTTCTCTACATGGGTGTGTCCTCACTCAAAGGCATCCAGTTCTTTGACCGTATCAAGCTGTTCTGCATGCCAGCTAAGCACCAGCCGGACCTGATCTACCTGCGCTACGTTCCCCTGTGGAAGGTCCATGTGTTCACCCTGGTGCAGCTCACCTGCCTGGTGCTGCTGTGGGTCATCAAGGCGTCTGCCGCCGCCGTCGTCTTCCCCATGATGGTGTTGGCCCTGGTGTTTATACGGAAGCTGCTGGACCTATGTTTCACCAACAGGGAGCTGAGCTGGTTGGACGACCTGATGCCTGAGagcaagaagaagaaggaggacgACAAGAAGAAGAAAGCCAAGGAGGAGGCCCAGCGCATGCTGGACGTGGAAGAGGGCATAGCACACCCCTGCGACGGGCCGGGCATCCTCAAGACCCTCAAAGTCAGTTTGGACCCCTCTATGGTAAACATTTCTGATGAAATGGCCAAAACTGCCAATTGGAAGTCTGTCTCCATGAACTCTGACAGTGCCAAAGCTCTGAAGCATAGTGGCAGCCAGGCGAAGGTGTCCTGTGTGAAGATAAACTTGGAGAATGACCAGGGGGAGAAGTATGGGGATGCTGAGACCTCCTTatgaaggagggatgggaggagcaGGGAGAGTGCCACTTCAGCCTCTAGCCCACCAGGTGGcgttgtcctcctgtcctcccacaCAGCAGGGGGCAGTGTCCTTCATGGCCCTGTCCGTTGCCCTAACAGCTGCTACCATACCAATGCCAAGGGGGCACACAAAGACACAACCACTTCTACTTAGCCATGTTTCTTTAGTTCTTATTGTGAAATTCGTCGGAAGGAaatttgttttttaattttaTCATCGTTTTAAGGTGAAAAAACATTAACTTTAGATTCAGGTGTGCCTTTTTTAAGGAACCACTTGGTCTTCTTGGAATGACTTTCATCAGGCTTTTTACCAACATATCCATAGTCTCTGTGATATGGTGTACAGTCTGTCCTCGTAACACTTACTTCGAGGGCAATGCATTATGAATGCATGTAGTGGCCTTTATCGCCCTTAGTGCATTATATTAGAGGAGTTGCTGTAAGCATTTCAAACTTGTCAAGACTGTCCCCAGGTGGTTTATAGGAAGCAGTAGGCCTAACAGCAGTCCAAGCACCCCGGGTGGCTTGACCACAACGACGGCTACTACTCACAGCACTCTATCTGGCTCACTCTGAACAATAGACACTTTCTGTTTGAGAAAGCAGGTGACGCTCAACAAAAGGTCCAAATACATTTGGAGCACATATTAGATTTGTGTGTGAGAAACTTAACAGCAGCTTAAGATGTCTTTTCACAATATCAGAGTCATGTGTACGATGTGCTGTTGATTCAGATTATCAGTCACAGTAGGTTGAAAGACTGAAGATGTTCTGTCAAAGTGAACATGACAGACCACAGCATAGCCCATAGTGTGCAGAATATTTCGTGAATTAATTGGCAAACATCTCTTACTAATCTTAAACAATCCCAAATTGGAAACGGACTATAATAAGATAACGTTTCAAAAACAAAATGTTCTCACATTTCTCGATTGAGCGGTCTTGTTATTTTGGTGTAATGGTGAGGGTATTGCCTGCAGTGTCCATGTCCATACATGGAAGGAAGAAAATATGTATAGAGTAAGTCTATGGAGGGTTCTAAAACTGATGCCTTCTTTAGGGCAGGTTTAAAGCTGTTCAATAGTGTtactatacatggctgtggtagccTGGGTTTAATCTAGTGTAGTGCACCTGCACCAAGGAAGTCTTACCAGAGCTGTAGCCTCCCCTTGGTTATGATGACGAGGGGAAACCCACTTTTATCCATTTAAACGGTTTACATCCAATGGAATATTTTCTGTTATGGGGTATATATTTTAGattgtctatatatatattttttatcattaCAAAATGTAATGCATTTAATTTATTTTGAGTGGGTCAACGTTGcagagtttggggggggggggggggcaggaagaGGGAGCAGTGTCGTTGTTTGTTGCTGGCCGGTAATTAATGTTCTTTATTTCCTGTCTTTATATCTGTGCACTTTAGATACGCCTGCCGCACAACGAGAGGGGTGGGCAGGCTATATGTACCTTTTTATATACATGTATCTATTTAGATCAGTCTCAGGAACCAATGGGCTCAAtgaggcccttctctctctctctcaccgtctctgtcagtctttc
>XM_036966756.1
ACCTGTAGGACTATTTGGACACCCACCCAGACTGTCTGCTCAGACCTGTAGGACTATTTGGACACCCACCCAGACTGTCTGCTCAGACCTGTAGGACTATTTGGGCACCCACCCAGACTGTCTGCTCCAACCACCTATTCACCATCCAGTGATTACAGCAGGACTTGGGTGCTCTTTAGTTGGCGGAGGTTCCGCCACTCTGCGGAGTCTGCCAGCCATGGACTTCTGGGGAGATATTGTCAATTTGAAGACCACCACAGCAGCCAAAGCTCcatgtgtgGGGAACGATGATGAGGCGGTGGTGGACCTGGGGAAGACTAGCTCCACCATTCACACCAACTTTGAGAAAGAGGAGCTAGAGAGTCACAGAGCGGTCTATGTGGGTGTCCATGTTCCTCTGGGCAGAGAGACCAAACGGAGGCACCACCGCAGCCACCGCGGCCACAGACACCACCGCAAGAGGAGAGACCGCTCGGACCATGAAGATGGACGAGAGTCTCCTTCCTATGACACCCCGTCCCAGCGGGTCCAGTTCATCCTGGGGAcagaggatgatgatgaagagcACATGCCCCACGACCTGTTCACTGAGCTGGACGAGCTGTTCTTCCGGGACGGACACGTCTACGAGTGGAGGGAGACAGCCAGGTGGTTAAAGTTTGAGGAAGAcgtggaggatggaggggagcGTTGGAGTAAGCCCTACGTAGCCACGCTGTCTCTCCACAGCCTCTTCGAGCTCCGCAGCTGCATCCTCAACGGCACTGTCATGTTGGACATGAGAGCTAACACCATTGAGGAGATCGCAgACATGGTGATAGACAGCATGGTGGCGTCGGCTCAGCTGGAGGAGGAGTTGAGGCAGAAGGTGAGGGAGGCCATGTTGAAGAGACACCACCACCAGAACGAGAAGAAGCTCAGCAACCGCATCCCTCTGGTGCGCTCCTTCGCTGACATCGGCAAGAAACAATCTGACCCACACCTGCTTGAGAGAAACTGCCTCCTGGCATCCCCCCAGTCAGCTCCTGGGAACCTGGAGAACAGTAAACCGAGTGAGAGCCGCATCAACggaggaagcagagagaacagcactGTGGACTTCAGCAAGGTGGACATGAACTTCATGAAGAAGATCCCTCCTGGGGCGGAGGCGTCCAACGTGCTGGTGGGAGAGGTGGAATTCCTGGAGCGACCAATCATAGCCTTCATCAGGCTGTCCCCCGCCGTGCTGCTCACTGGTCTCACTGAGGTGCCTGTACCCACCAGGTTCCTGTTCCTGCTGCTGGGTCCGTTTGGGAAGGGTCCTCAGTACCACGAGATCGGCCGCTCCATTGCCACGCTGATGACAGACGAGGTCTTCCATGATGTAGCGTACAAGGCCAAAGACCGGAACGATCTGCTGTCGGGGATAGATGAGTTTCTGGACCAGGTGACCGTCCTACCCCCAGGAGAGTGGGACCCTACAATACGAATCGAGCCCCCCAAGAGTGTCCCATCTCAGGACAAGAGGAAGATGCCCTCATTGCCCAACGGCTCTGCCCATAATGAGTCCTTCAAGGAAGACCAGCACCAAGCAGGACCAGAGCTACAGAGGACAGGGAGgatCTTTGGGGGCCTGGTGATGGATGTAAGGAGGAAAGCTCCGTTCCTGTGGGGAGATATTAGGGATGCTCTGAGCCTGCAGTGCCTGGCCTCTGTGCTGTTCCTCTACTGCGCCTGCATGTCCCCTGTCATCACTTTCGGAGGCCTGCTGGGCGAGGCCACCAAGGGAAACATTAGTGCGATCGAGTCGTTGTTCGGGGCGTCTCTGACGGGCGTGGCCTTCTCCATGTTTGCGGGCCAGCCACTCACCATCCTGGGCAGCACCGGACCAGTCCTGGTCTTTGAGAAGATCCTCTTTAAGTTCTGCAGTGACTACGACCTGTCCTACCTGTCCTTGAGGACCAGCATCGGCCTGTGGACGGCCTTCCTGTGCCTCGTCCTGGTTGCCACGGACGCCAGCTCCCTGGTCTGTTACATCACCCGCTTCACAGAGGAAGCCTTCGCAGCGCTCATCTGCATCATCTTCATCTACGAGGCCCTGGAGAAGCTGGTTCACCTGGGGGAACTCTACCCCATCAACATGAACAACAAGCTGGACAACCTTACCTTCTACATATGTCAATGTTCTCCGCCGGTTAACGCCACGCCTGAGATCCAGCAGGTCTGGAACCACAGCGGGGTCGCACCAGAATCAATATCTTGGACCCAACTGGATGTCGATGAGTGTTCTAGGCTGCGTGGGGAGTTTATTGGGCCAGCTTGCGGCCAACATGGTCCCTACATCCCTGACGTCCTCTTCTGGTCCGTCATCCTCTTCTTCACtaccttcttcctctcctccttcctcaagCAGTTCAAGACCAAGCTCTACTTTCCCACCAAGGTACGGTCGACCATCAGTGACTTCGCGGTCTTCCTGACCATCATGATCATGGTCCTGGTGGACTACCTGGTGGGCATTCCCTCCCCCAAACTGAATGTGCCTGACCGCTTTCAGCCCACGTCTGAGAACCGTGGCTGGGTGATCTCCCCGCTGGGGACCAACCCCTGGTGGACCATGCTGGCTGCAGCCATCCCTGCCCTGCTCTGCACCATCCTCATCTTCATGGACCAGCAGATCACCGCCGTCATCATCAACAGGAAGGAGCACAAACTCAAGAAAGGCTGTGGCTACCACCTGGATCTTCTGGTGGTGTCTGTGATGCTGGGGGTGTGCTCCATCATGGGCCTGCCCTGGTTTGTAGCGGCCACCGTGCTCTCCATCTCCCACGTCAACAGTCTGAAGCTGGAGTCAGAGTGCTCGGCCCCTGGGGAACAGCCCAAGTTCCTGGGGATCAGAGAGCAGAGGGTCACCAGCTTCATGATCTTCATCCTCATGGGCTGCTCTGTCTTCATGACCTCGGTGCTCAAGTTCATCCCTATGCCAGTCCTCTACGGGGTGTTTCTCTACATGGGTGTGTCCTCACTCAAAGGCATCCAGTTCTTTGACCGTATCAAGCTGTTCTGCATGCCAGCTAAGCACCAGCCGGACCTGATCTACCTGCGCTACGTTCCCCTGTGGAAGGTCCATGTGTTCACCCTGGTGCAGCTCACCTGCCTGGTGCTGCTGTGGGTCATCAAGGCGTCTGCCGCCGCCGTCGTCTTCCCCATGATGGTGTTGGCCCTGGTGTTTATACGGAAGCTGCTGGACCTATGTTTCACCAACAGGGAGCTGAGCTGGTTGGACGACCTGATGCCTGAGagcaagaagaagaaggaggacgACAAGAAGAAGAAAGCCAAGGAGGAGGCCCAGCGCATGCTGGACGTGGAAGAGGGCATAGCACACCCCTGCGACGGGCCGGGCATCCTCAAGACCCTCAAAGTCAGTTTGGACCCCTCTATGGTAAACATTTCTGATGAAATGGCCAAAACTGCCAATTGGAAGTCTGTCTCCATGAACTCTGACAGTGCCAAAGCTCTGAAGCATAGTGGCAGCCAGGCGAAGGTGTCCTGTGTGAAGATAAACTTGGAGAATGACCAGGGGGAGAAGTATGGGGATGCTGAGACCTCCTTatgaaggagggatgggaggagcaGGGAGAGTGCCAC

Function

symbol description
slc4a7 Predicted to enable inorganic anion exchanger activity. Predicted to act upstream of or within anion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC4A7 (solute carrier family 4 member 7).

NR:

description
PREDICTED: sodium bicarbonate cotransporter 3 isoform X4

GO: NA

KEGG:

id description
K13861 SLC4A10, NCBE; solute carrier family 4 (sodium bicarbonate transporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966755.1 False 5123 mRNA 0.52 25 5637262 5706145
XM_036966756.1 True 3633 mRNA 0.57 25 5659344 5704565

Neighbor

gene id symbol gene type direction distance location
LOC110535491 LOC106606078 coding upstream 9826 5533015 ~ 5627436 (+)
LOC118936615 LOC106585480 coding upstream 25140 5605777 ~ 5612122 (+)
LOC110493157 LOC106585480 coding upstream 100139 5504091 ~ 5537123 (+)
LOC118944860 NA coding upstream 116861 5520091 ~ 5520401 (+)
LOC118944859 LOC106585606 coding upstream 133789 5498544 ~ 5503473 (+)
LOC110535554 LOC106605965 coding downstream 23772 5729917 ~ 5733058 (+)
cklf7 cklf7 coding downstream 29661 5735806 ~ 5744817 (+)
trnat-ugu-30 NA coding downstream 94732 5800877 ~ 5800949 (+)
LOC110508149 LOC106593364 coding downstream 116246 5822391 ~ 5898142 (+)
LOC110508220 sc61b coding downstream 251112 5957257 ~ 5963980 (+)
G218487 NA non-coding upstream 3781 5543930 ~ 5633481 (+)
G218486 NA non-coding upstream 8121 5538574 ~ 5629141 (+)
G218497 LOC106585480 non-coding upstream 34850 5596586 ~ 5602412 (+)
G218476 LOC106585544 non-coding upstream 62702 5474121 ~ 5574560 (+)
G218507 NA non-coding downstream 181 5706326 ~ 5708029 (+)
G218544 NA non-coding downstream 2732 5708877 ~ 5709087 (+)
G218547 NA non-coding downstream 9504 5715649 ~ 5715874 (+)
G218551 NA non-coding downstream 20930 5727075 ~ 5727534 (+)
G218553 NA non-coding downstream 22293 5728438 ~ 5728739 (+)
G218465 NA other upstream 75991 5460092 ~ 5561271 (+)
G218301 NA other upstream 311253 5325427 ~ 5326009 (+)
LOC110507709 LOC106574077 other upstream 615389 5018589 ~ 5026840 (+)
G218558 NA other downstream 42080 5748225 ~ 5748742 (+)
LOC110535756 stx17 other downstream 423185 6129251 ~ 6157940 (+)
LOC110534148 invs other downstream 501358 6174662 ~ 6228920 (+)

Expression


Co-expression Network