cklf7 (cklf7)


Basic Information

Item Value
gene id cklf7
gene name cklf7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5735806 ~ 5744817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165218.1
AAGTAGACGAAGCACAGTAGTAGCAGCTGACTGTGTTTCTTGGGCCACGATACACTGTAGTCTAGACTATTtacactgtattttatttatttatacatatCAAAATGTCTCATACTGTtgttactaccaccaccacgacgAGATCGTCTTCGGGCGAAGGATTCTTGAATTTGGGCTATACTCGCTCTGTACAAGGATTACTGAAAATCGCCCAAGTGGTAGCCCTCCTGATTGCGTTCCTGTGTGTACACTGTGCACGAGGTTGGACTGATTACTCAGCCTTTCGGTACTTTGAGGTGGTGACGCTATGGTTCCTCATAGCCTTCCTCATCTTCTACCTCATGTATGTGTTCAGACTGCAGAGTAAGATCCCCTGTATCAACTGGACAATGACGGAGTTACTGCATTATGGCGTTGGGACCATCCTGGTCTTCATTGCCTCTATTGTTGCAGCTGTTAAGAGTGGAGGTGTGTCTGAACTAGAAGCTGGTTCGGCATTTGGCTTCATCGCCACATTCCTACTGGCTGTCAGCATATGGACATCCTATAAGGTCACATGTGGTTCCCAGCCAACCAGTGCTTCTGTGTAAAACGGATCTATCATTTCTTCCCCTCAAGTACCAAGATGACTTCATTGTCAGTGTGCTGTGCGACAGTAACTTCTTACCCCAACAACTGGCCCGGGGCCCATTAAACAATCAGAAGTTCAGCTTAGCCCGAGACTGGTTTCACTTCAGGATAGTTACAAGTTAGCCAGTTAACTTTGTTAAACACTCTATTTTGTACAGTTTACAAAGAATGCTTAAAGTAATTTCTCCTTCTTTGAGATACACCGTCCTGATGACCGGTCAGTTGTTAGGGATAAGAAGTCACCTGTGTCTGCTTTGAAGAGCAGGCAGCTGTTGTTTCATATAAGTGCCTCCAGAGTGTTTAAACCAAGGGCTAGGCTGAGAGCCAGACCAAACCACCCCTCCATCTTGAATGGTGGCTATTTGAATGCTTTGAAATCAAGAGGacataagctgtttttcagtgttGCCCTGAAGCTTTTTAGAGTTAGATATGTCAATGCCACTCTTGtttacattatttatttgagagcAAATGTTTATGATGATAGTTTTGTGCTTTTATGTTCACGTATGTCTGTCACAGTATTATAGGCTGCTTATGAGAAGAATCTCATCATAAAAAGGTCAACCGTCATACAGCCTCACACTATCACATGTATTTAAACAGCTCTTCTTTATCTGATGTGTTTGAGTTTGTATATGGGTTTATATTTCAAACATGCTTTTGGTTGACTGAAGTAAAAGGGAAACCCAACAGCATCCATGTCTCTGAATCCTTGTTTGTTGAAAATAAGATATTgagaccagtggaggctccttagaggaggaaggggaggaccatcctcagtgaatttcataaaaatagtgaaacatcaagttatcctttttagataaaaactataaatatattcacgtcatccatgttttactccatgtgtaactctgtgtcgttgtatctgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtaaaataaataaataaataaatcccaaaaatggattaaaacgc

Function

NR:

description
CKLF-like MARVEL transmembrane domain-containing protein 7

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165218.1 True 1657 mRNA 0.41 5 5735806 5744817

Neighbor

gene id symbol gene type direction distance location
LOC110535554 LOC106605965 coding upstream 2748 5729917 ~ 5733058 (+)
LOC110534121 slc4a7 coding upstream 29661 5637262 ~ 5706145 (+)
LOC110535491 LOC106606078 coding upstream 108370 5533015 ~ 5627436 (+)
LOC118936615 LOC106585480 coding upstream 123684 5605777 ~ 5612122 (+)
LOC110493157 LOC106585480 coding upstream 198683 5504091 ~ 5537123 (+)
trnat-ugu-30 NA coding downstream 56060 5800877 ~ 5800949 (+)
LOC110508149 LOC106593364 coding downstream 77574 5822391 ~ 5898142 (+)
LOC110508220 sc61b coding downstream 212440 5957257 ~ 5963980 (+)
LOC110534158 nr4a3 coding downstream 343688 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 384434 6129251 ~ 6157940 (+)
G218530 NA non-coding upstream 490 5734783 ~ 5735316 (+)
G218553 NA non-coding upstream 7067 5728438 ~ 5728739 (+)
G218551 NA non-coding upstream 8272 5727075 ~ 5727534 (+)
G218547 NA non-coding upstream 19932 5715649 ~ 5715874 (+)
G218544 NA non-coding upstream 26719 5708877 ~ 5709087 (+)
G218559 NA non-coding downstream 5613 5750430 ~ 5750652 (+)
G218528 NA non-coding downstream 8511 5753328 ~ 5754411 (+)
G218561 NA non-coding downstream 10229 5755046 ~ 5756568 (+)
G218562 NA non-coding downstream 12553 5757370 ~ 5758235 (+)
G218563 NA non-coding downstream 14676 5759493 ~ 5759798 (+)
G218487 NA other upstream 102325 5543930 ~ 5633481 (+)
G218465 NA other upstream 174535 5460092 ~ 5561271 (+)
G218301 NA other upstream 409797 5325427 ~ 5326009 (+)
LOC110507709 LOC106574077 other upstream 713933 5018589 ~ 5026840 (+)
G218558 NA other downstream 3408 5748225 ~ 5748742 (+)
LOC110534148 invs other downstream 462686 6174662 ~ 6228920 (+)

Expression


Co-expression Network