Gene
RNA
| Item | Value |
|---|---|
| gene id | trnat-cgu-2 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 6223797 ~ 6223869 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnat-cgu-2 | True | 73 | mRNA | 0.46 | 1 | 6223797 | 6223869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535692 | LOC106593159 | coding | downstream | 50401 | 6158030 ~ 6173396 (-) |
| LOC110520778 | LOC106606060 | coding | downstream | 266765 | 5951557 ~ 5957032 (-) |
| LOC110508167 | LOC106606061 | coding | downstream | 290840 | 5927299 ~ 5932957 (-) |
| LOC110508150 | tmem245 | coding | downstream | 298126 | 5908171 ~ 5925671 (-) |
| LOC110508233 | NA | coding | downstream | 305996 | 5913078 ~ 5917801 (-) |
| LOC110535643 | tex10 | coding | upstream | 5043 | 6228912 ~ 6259816 (-) |
| LOC110535663 | cdh17 | coding | upstream | 76128 | 6299997 ~ 6325652 (-) |
| LOC118936454 | LOC106605946 | coding | upstream | 104225 | 6328094 ~ 6332714 (-) |
| LOC118944879 | LOC106605946 | coding | upstream | 109106 | 6332975 ~ 6333735 (-) |
| LOC110534138 | LOC106605946 | coding | upstream | 114023 | 6329602 ~ 6349701 (-) |
| G219782 | NA | non-coding | downstream | 16694 | 6205869 ~ 6207103 (-) |
| G219762 | NA | non-coding | downstream | 37832 | 6182169 ~ 6185965 (-) |
| G219761 | NA | non-coding | downstream | 41766 | 6181781 ~ 6182031 (-) |
| G219733 | NA | non-coding | downstream | 65863 | 6156215 ~ 6157934 (-) |
| G219748 | NA | non-coding | downstream | 69849 | 6153491 ~ 6153948 (-) |
| G219798 | NA | non-coding | upstream | 12329 | 6236198 ~ 6236600 (-) |
| G219799 | NA | non-coding | upstream | 15100 | 6238969 ~ 6240513 (-) |
| G219775 | NA | non-coding | upstream | 24236 | 6248105 ~ 6249556 (-) |
| G219776 | NA | non-coding | upstream | 33141 | 6257010 ~ 6257525 (-) |
| G219802 | NA | non-coding | upstream | 39508 | 6263377 ~ 6263852 (-) |
| G219592 | NA | other | downstream | 471703 | 5751724 ~ 5752094 (-) |
| G219591 | NA | other | downstream | 475083 | 5748158 ~ 5748714 (-) |
| G219500 | NA | other | downstream | 535506 | 5687725 ~ 5688291 (-) |
| G219290 | LOC106593286 | other | downstream | 1214391 | 5008084 ~ 5009406 (-) |
| G219200 | NA | other | downstream | 1451746 | 4770350 ~ 4772051 (-) |
| G219820 | LOC106605946 | other | upstream | 109099 | 6332968 ~ 6338813 (-) |
| LOC110507902 | LOC106593870 | other | upstream | 262631 | 6479543 ~ 6491729 (-) |
| LOC110508304 | gtpbp10 | other | upstream | 706122 | 6929457 ~ 6932661 (-) |
| LOC118964351 | LOC106605995 | other | upstream | 724929 | 6948445 ~ 6952369 (-) |
