LOC110508070


Basic Information

Item Value
gene id LOC110508070
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6492214 ~ 6496204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588519.2
tAGGTCCATTATAATGCAAGCATGTGTTTTCTAAATGGCCAATGAGAGGAAGGTTGAATGTCAGAGGTCATAGATCAGGTCAATGTTGAGTGTGATAAATCGACAGTAGTCATTCCTCCTCAGTCACTACAGCCTGTAGTGACTCTGAACAGAGTGTACCTGTATCTGGACCAAAGCAGATGAGGTCTGACCTTGACATCTTCCTGGGGTAGTTTGGAAAACAGCATGGTCtgactgtcacgtcctgaccttagagatccacatttattctctatgtttggttagggcagggtgtgactcggCAGAGCCGTGATGGTAGAGAGGTGTGTTGCTGAAGGGACTGCAGCATCCATTCCTGGTGGGGCTCCACTTCTCCTTCCAGACCTCTCACACTCCTTCGTACTGGACTACATCAATGGAGGAGAGTTGTTCTACCATCTCCAGAGGGAGGGAACCTTCCCAGAGCAACATTCTCAGCCCTGGGCTACCTCCCCTCCCTCAACagtctacagacCTGAAGCCAGAGAACATCTTATTGGACAGTGGAGGTCATGTGGTTCTGACGGATTTCGTGCTGTGTAAAGAGGGCATGTCTGTGGGTGGGACTATGCAAACCTTCTGTGGAACCCCTGAGTATCTGGCGCCAGAGGTGCTGTTAGGCCACACCTGCTGTGGAGCTGTGGACTGGTGGGGGCTGGGGAGTGTACTTTATGAGATGCTTCATGGACTGccCCCGTTCTACAGTCGCAGTAAGGCCGAGATGTTTGAGAACATCCTTCACGCCCCCCTGCAGCTCCATAGAAGTGTGTCCCAGTCTGCCTGGACTCTGCTGCAGAGCCTGCTGGAGAGAGACTGTACCAAACACCTTGGGGGGGAACATGACCTTtCTGGTCCGTGTGATATGAGGTATTTTGACCCGGAGTTCACGCTTCTTCCAGCCCCCGCCTCCCTCGGTTTGAGTGACATGTTGGGAGACGTGGCCAATGGAGCCTTCCCAGGGTTCTCCTATATGTCTCCGGCTGAGGTTGGAGTCACAGAGCCCTGATATCATTCTAATATTTGTGTGTTGAATAAATTAAAATGCATTTTCC

Function

NR:

description
serine/threonine-protein kinase Sgk1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588519.2 True 1091 mRNA 0.51 5 6492214 6496204

Neighbor

gene id symbol gene type direction distance location
LOC110508031 esrp1 coding upstream 43253 6426134 ~ 6448961 (+)
LOC110489435 LOC106570746 coding upstream 92598 6377288 ~ 6399616 (+)
LOC110535685 LOC106606054 coding upstream 202044 6277474 ~ 6290170 (+)
LOC110534143 tmem67 coding upstream 215060 6259904 ~ 6277154 (+)
LOC110535707 LOC106574428 coding upstream 237973 6248078 ~ 6254241 (+)
LOC110507908 LOC106605953 coding downstream 3341 6499545 ~ 6510342 (+)
LOC110508080 LOC106606035 coding downstream 17088 6513292 ~ 6527389 (+)
LOC110520771 fam171a1 coding downstream 64785 6560989 ~ 6607009 (+)
nmt2 LOC106576081 coding downstream 114895 6611099 ~ 6620958 (+)
LOC110507851 acbd7 coding downstream 128371 6624575 ~ 6631601 (+)
G218842 LOC106605951 non-coding upstream 37012 6450338 ~ 6455202 (+)
G218839 NA non-coding upstream 52568 6434447 ~ 6439646 (+)
G218805 NA non-coding upstream 85128 6344845 ~ 6407086 (+)
G218807 NA non-coding upstream 137734 6353777 ~ 6354480 (+)
G218801 NA non-coding upstream 150036 6341950 ~ 6342178 (+)
G218862 NA non-coding downstream 20664 6516868 ~ 6545971 (+)
G218892 NA non-coding downstream 60573 6556777 ~ 6609484 (+)
G218929 NA non-coding downstream 102023 6598227 ~ 6599147 (+)
G218966 NA non-coding downstream 204644 6700848 ~ 6701347 (+)
LOC110534148 invs other upstream 281247 6174662 ~ 6228920 (+)
LOC110535756 stx17 other upstream 336077 6129251 ~ 6157940 (+)
G218971 NA other downstream 221424 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 298356 6794547 ~ 6811294 (+)
LOC110520781 osgin2 other downstream 442396 6937600 ~ 6947976 (+)

Expression


Co-expression Network