LOC110507851 (acbd7)


Basic Information

Item Value
gene id LOC110507851
gene name acbd7
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6624575 ~ 6631601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588216.2
TGCGGTCCCGACTCCCGAGGCATTGACCGATATTTACTGTAAGCTCCCAGTCTGTCACAGCTGCAGTCAGAGCTATTAACACAGCCGAGAGGACACTTTGGGATAATTCTACCTACAGTAGCCTGCGGAGTTGAACTTTGCGAGATGTCTCTTCAGGCAGAGTTTGAGCGAGTAGCAGATGATGTGAAGAAGGTGAAGTCCAGACCTTCAGACCAGGAGCTGCTGGACATGTATGGTCTGTATAAGCAGGCCATATTTGGAGACATCAACATTGACAAGCCAGGCATGTTAGACATGAAGGGAAAAGCCAAGTGGGAGGCCTGGGATTCTaggaaagGTATGTCCAAGGAGGATGCCATGACAGCTTACATCGCACTTGCAAAGGAGATCATCAGCAAATACTAATATGATGATGAAGTCGTTTCCAGGGTGTGACTAGAAATGGTTATTATGAGGAGAGCTGTATCTCATTCAGCCACAAGCCATATGTTACGAGAAGCTACTGCACGAGGAACATGATTAATTTTTTTCTCCTTAGATTGAACTTTCTTGACTTTTAAAATGTGGAGTTTTTTTATTTGATATCAACCCCTGTGCACTTTTGGGATGTTGAATTTATGATTTAATAAAACATTGTTTTAAATTAC
>TU249650
GACTCCCGAGGCATTGACCGATATTTACTGTAAGCTCCCAGTCTGTCACAGCTGCAGTCAGAGCTATTAACACAGCCGAGAGGACACTTTGGGATAATTCTACCTACAGTAGCCTGCGGAGTTGAACTTTGCGAGATGTCTCTTCAGGCAGAGTTTGAGCGAGTAGCAGATGATGTGAAGAAGGTGAAGTCCAGACCTTCAGACCAGGAGCTGCTGGACATGTATGGTCTGTATAAGCAGGCCATATTTGGAGACATCAACATTGACAAGCCAGGCATGTTAGACATGAAGGGAAAAGCCAAGTGGGAGGCCTGGGATTCTaggaaagGTATGTCCAAGGAGGATGCCATGACAGCTTACATCGCACTTGCAAAGGAGATCATCAGCAAATACTAATATGATGATGAAGTCGTTTCCAGGGTGTGACTAGAAATGGTTATTATGAGGAGAGCTGTATCTCATTCAGCCACAAGCCATATGTTACGAGAAGCTACTGCACGAGGAACATGATTAATTTTTTTCTCCTTAGATTGAACTTTCTTGACTTTTAAAATGTGGAGTTTTTTTATTTGATATCAACCCCTGTGCACTTTTGGGATGTTGAATTTATGATTTAATAAAACATTGTTTTAAATTAC

Function

symbol description
acbd7 Predicted to enable fatty-acyl-CoA binding activity. Is expressed in central nervous system; neural crest; and yolk syncytial layer. Orthologous to human ACBD7 (acyl-CoA binding domain containing 7).

NR:

description
acyl-CoA-binding domain-containing protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588216.2 False 647 mRNA 0.43 4 6624575 6631601
TU249650 True 638 TUCP 0.35 4 6624584 6631601

Neighbor

gene id symbol gene type direction distance location
nmt2 LOC106576081 coding upstream 3617 6611099 ~ 6620958 (+)
LOC110520771 fam171a1 coding upstream 17566 6560989 ~ 6607009 (+)
LOC110508080 LOC106606035 coding upstream 97186 6513292 ~ 6527389 (+)
LOC110507908 LOC106605953 coding upstream 114233 6499545 ~ 6510342 (+)
LOC110508070 NA coding upstream 128371 6492214 ~ 6496204 (+)
LOC118936368 NA coding downstream 513 6632114 ~ 6635038 (+)
LOC110507805 LOC106606004 coding downstream 10902 6642503 ~ 6654110 (+)
LOC110507826 LOC106576069 coding downstream 28123 6659724 ~ 6712667 (+)
LOC110507743 LOC106605986 coding downstream 123238 6754839 ~ 6773064 (+)
LOC110507774 LOC106605985 coding downstream 143376 6773881 ~ 6777798 (+)
G218892 NA non-coding upstream 15091 6556777 ~ 6609484 (+)
G218929 NA non-coding upstream 25428 6598227 ~ 6599147 (+)
G218862 NA non-coding upstream 78604 6516868 ~ 6545971 (+)
G218842 LOC106605951 non-coding upstream 169373 6450338 ~ 6455202 (+)
G218966 NA non-coding downstream 69247 6700848 ~ 6701347 (+)
G218986 NA non-coding downstream 103419 6735020 ~ 6735498 (+)
G219017 NA non-coding downstream 166273 6797874 ~ 6801798 (+)
LOC110534143 tmem67 other upstream 362218 6259904 ~ 6277154 (+)
LOC110535707 LOC106574428 other upstream 370984 6248078 ~ 6254241 (+)
LOC110534148 invs other upstream 413608 6174662 ~ 6228920 (+)
G218971 NA other downstream 86027 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 162959 6794547 ~ 6811294 (+)
LOC110520781 osgin2 other downstream 306999 6937600 ~ 6947976 (+)
LOC110508323 LOC106575347 other downstream 347530 6979131 ~ 6988449 (+)
LOC110536044 LOC106575458 other downstream 716691 7348131 ~ 7357408 (+)

Expression


Co-expression Network