LOC110507843 (LOC106576069)


Basic Information

Item Value
gene id LOC110507843
gene name LOC106576069
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6656513 ~ 6656888 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588207.2
ATGGTCAACCAGGTGTCAGAGTACCCTGCTGAGCAAACGTTCCAGTACCAGCATAGCCTGCCTCCTCTCCCTGTACCGTCTCTAGAGGGGAGCGTCGCCAAGTACCTGGATGCAGTGCGGCCGTTTGTTACAGAGGAGGAGTACCAGGTGACTGCAGCCGTAGTGAAGAGGTTTGGAGAGGGCATCGACAAAGACCTGCACCAAAAACTACTGCAGAGagccaggacacacaggaactgggtacacacactcaacacactgCACAGCTAG

Function

NR:

description
peroxisomal carnitine O-octanoyltransferase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588207.2 True 270 mRNA 0.55 2 6656513 6656888

Neighbor

gene id symbol gene type direction distance location
LOC110507876 rpp38 coding downstream 32546 6622171 ~ 6623967 (-)
LOC110508127 NA coding downstream 106115 6527175 ~ 6550398 (-)
cf191 cf191 coding downstream 156933 6496695 ~ 6499580 (-)
LOC110507902 LOC106593870 coding downstream 164784 6479543 ~ 6491729 (-)
epb41l4b LOC106605949 coding downstream 177105 6454833 ~ 6479408 (-)
LOC110507788 LOC106574611 coding upstream 57355 6714243 ~ 6744673 (-)
LOC110507764 LOC106576048 coding upstream 119593 6776481 ~ 6794278 (-)
LOC118945258 NA coding upstream 209137 6862876 ~ 6869053 (-)
LOC110508277 cld12 coding upstream 244590 6901478 ~ 6905286 (-)
LOC110508304 gtpbp10 coding upstream 272569 6929457 ~ 6932661 (-)
G219988 LOC100136012 non-coding downstream 14358 6638940 ~ 6642155 (-)
G219970 fam171a1 non-coding downstream 49505 6603182 ~ 6607008 (-)
G219822 NA non-coding downstream 249445 6344657 ~ 6407068 (-)
G219847 NA non-coding downstream 270304 6385989 ~ 6386209 (-)
G219999 NA non-coding upstream 2857 6659745 ~ 6660111 (-)
G219933 NA non-coding upstream 55292 6712180 ~ 6783455 (-)
G219952 NA non-coding upstream 116474 6773362 ~ 6774340 (-)
G220056 NA non-coding upstream 158798 6815686 ~ 6815896 (-)
G219936 NA non-coding upstream 159397 6816285 ~ 6816505 (-)
LOC110534138 LOC106605946 other downstream 314900 6329602 ~ 6349701 (-)
G219820 LOC106605946 other downstream 317700 6332968 ~ 6338813 (-)
G219592 NA other downstream 904419 5751724 ~ 5752094 (-)
G219591 NA other downstream 907799 5748158 ~ 5748714 (-)
LOC118964351 LOC106605995 other upstream 291910 6948445 ~ 6952369 (-)
G220202 LOC106605995 other upstream 295671 6952559 ~ 6952963 (-)
G220209 LOC105030512 other upstream 310193 6967081 ~ 6970500 (-)
LOC110508339 NA other upstream 332094 6988898 ~ 6993845 (-)

Expression


Co-expression Network