LOC110507732 (LOC106576036)


Basic Information

Item Value
gene id LOC110507732
gene name LOC106576036
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6794547 ~ 6811294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587946.2
GATGGGATTTTTCGAAGCGGGAAAGGACATAGAACATCTATGGCACAACAAAATATTATGGCAACAAAGTAATCTTAGCGGAACCAAAACAATTTAAAGATACTATTGAAATTTCGTGAAAATCGGTTGTAACAAATGTCAATTTACGGAAATATATTGTTTTACAAGACCACAGGCTCTCACGAGGAGAATACAATGATATTCTATTCTCCTCTTAAATTATGAAATCTAGACGCACCCAAAAGTCTACAAAACCCCGTTTACAAGACCCCAAACTCGCTGATAAGGGGCACAAGTCAGCCTCGAAAAGCCATGCCAAACCACCATGTGAATCGTATCCTGCCCCAAAAAAGCCTTTCACTGGGAAACTATTCTACTTAGATTTGCCATCAAACAGAAGAGCAGAGACATTAGAGAATGATATCAAAAGGTTTGGAGGGACGGTGGAGAAATTCTTCAGCAAGGAGATCAAGTACCTGGTGTCTAATAAGAGAGAGGCCAGGTATGTGCAGTGTCATGGCCGCGACCCTCTTGTCCCAAGCCCTGACTCTGGGCACAGCTCCCCCCACCCTCGCCCCCATCCCGGCAGCCACAGAGACAGCCTCAAAGGAAGCTCCCAGGGCCAGGCAAACATGGTGGTCATAAGCAGGGGCAAGTCTTTTGTGAAGAGAGTTGTAAAAGAGCAGGTGAGAATACAGGTCAACGAGATCCTAACCAATGCTCTGGAGTGGGGAGTGAAAATCCTGTATattgatgATGTAATGGCTTATATGGAAAAGAAGAAAAGTAATGTTAAGTATACTGCTGAAAAGCCAACCGCAACCACAGCTGCTGTCAAAAAAAGTGCCAAAAGAGAACCTACAGGAAAACCATCCTTCCAGAAGTATAAGGGTGGAAGGATCCGTAAACCCTTTGTAAAGGTAGTGGACTCCAGCAGACATTACCGTCCAATTTATCTGGCCATGCCGAACATGCCAGAGTTTAACCTAACGTCAGCTCCCCCCTGCAGTCCATTCTATGTAGAGGACCAGGAACACTCTGGGAAGAGACCTAAAGTGCACGGAAACCGAGGGGCGAGAGTGTCAgccagtgaggagagggggcAGGACCGGGCCAGGAGGAACAGGGAGAAGAAACGTGGAGGCTACTGCGAGTGCTGCACGCTCAAATACAACAACATCAAAGCTCACCTGCGGAGTGAGCAGCACAAGGCCTTCTCCAGAAGTGATGAGTACCTGGTGGTGGACAGGCTCATCACCACACTGCCCTTCAACTTCAGTCATGTCAAAACAACACAAACTCCAACCACAAGGTCAAAGTACAGCATAACCTCCCAGTTGTGTGTTCCTGGACCCAGCatacagatggaggaagagaaggagggaggtgtGGAAACCAAAGAGCTGAAGGGGGGATTAATGTCCCTCTGGTCTACTACAGTGGAGCCCCCTCTCTCCCAGAGTGTGGAAAACCCCTTGGAACAGCCTCGGAAGCGCAGCCGAGGAGCCCCTGTTCCCCACAGCACCAGCGAGGGGGAGAAGAGGTGCTCTTACGTCCCAGACAGACCCCAGCCCAAGCACAGATCCCTGTCCTGCAAACAACGCTGCCAACGGGGATCCCCCCGCAAGCACCGCCAGAGGGCTGGGCTGAGTCAGACACCTGTGTCTAATGCAGAAATAGACCCTTCTACCTTTGACTCTGTCGCTAACCCCAGACTTTCCCATCAGGGCCAGAGAACTCACACAGACAAAGATGGCCGCTCTTCATTTAGTCACACAGAGGATTTACAATGTGGCGATCCAGCTGGACGTGTGAAGGTCCCTTCCAGTCAGCACAAGGTTGCAGGGCCTTCAGAACACCACAAGCTCAGAGCTTTAGAGGAGAGTGAACTGAGTCATGATACGTTGGCTGGGGATACTCTTTCCGGGAATGCTGGGGGTGTTCCGGAGCTCGAGGCAGGTGACACGGAGACACACATCCCTCCTCCTGCCAGGACATTACAGAGGAGGGTCAGGGATTACAGACGGAAGAGAAGGAAAGTTGAGAAGCAGCAGAATGCTCAGGAGCAGGAAAAAACGTGCAATGTTCCCAGCAGCTCTCTGCTGAACCTCTGGCAGCTGTTCCACTCCAGTGAGGACATGGAGTGTGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATGGAGTGCGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATAGACTGGGAGTTCCAGGCCTTCCCcagctagagaggagaggggggggttaGGGTAACCCAGAATCTTCCCAATATGAGCGCTAACTTGTTACGGACTCACCATATGAACTTATTGTATGACAGTTTCATTGAGTGACATAGCAGATCTATATGGGAACCCATTGACTGTGGCTCTTTAAACCTATGacttctataaagggaatagttcCCTTCAGGTTGGGAGGGTGGTGGCGCAACACTGTTGTGTTGATTTAACCATGGCAGCTTCTAGTCTACCTGGCTATTTTAACATGACTGGTTTTATCTGGAGAACAGGCTGGAGCACTATCCTCGGTTCTGTACAACGCCTGCATGTGTTCTGGTGTCCAGAGGAACTGTATGGTTGTGTTTTTGGTATGTGgtattgtacattttttttttattaaaagggATACAACCGAAGGTC
>XM_021587937.2
GGGATTTTTCGAAGCGGGAAAGGACATAGAACATCTATGGCACAACAAAATATTATGGCAACAAAGTAATCTTAGCGGAACCAAAACAATTTAAAGATACTATTGAAATTTCGTGAAAATCGGTTGTAACAAATGTCAATTTACGGAAATATATTGTTTTACAAGACCACAGGCTCTCACGAGGAGAATACAATGATATTCTATTCTCCTCTTAAATTATGAAATCTAGACGCACCCAAAAGTCTACAAAACCCCGTTTACAAGACCCCAAACTCGCTGATAAGGGGCACAAGTCAGCCTCGAAAAGCCATGCCAAACCACCATGTGAATCGTATCCTGCCCCAAAAAAGCCTTTCACTGGGAAACTATTCTACTTAGATTTGCCATCAAACAGAAGAGCAGAGACATTAGAGAATGATATCAAAAGGTTTGGAGGGACGGTGGAGAAATTCTTCAGCAAGGAGATCAAGTACCTGGTGTCTAATAAGAGAGAGGCCAGGTATGTGCAGTGTCATGGCCGCGACCCTCTTGTCCCAAGCCCTGACTCTGGGCACAGCTCCCCCCACCCTCGCCCCCATCCCGGCAGCCACAGAGACAGCCTCAAAGGAAGCTCCCAGGGCCAGGCAAACATGGTGGTCATAAGCAGGGGCAAGTCTTTTGTGAAGAGAGTTGTAAAAGAGCAGGTGAGAATACAGGTCAACGAGATCCTAACCAATGCTCTGGAGTGGGGAGTGAAAATCCTGTATattgatgATGTAATGGCTTATATGGAAAAGAAGAAAAGTAATGTTAAGTATACTGCTGAAAAGCCAACCGCAACCACAGCTGCTGTCAAAAAAAGTGCCAAAAGAGAACCTACAGGAAAACCATCCTTCCAGAAGTATAAGGGTGGAAGGATCCGTAAACCCTTTGTAAAGGTAGTGGACTCCAGCAGACATTACCGTCCAATTTATCTGGCCATGCCGAACATGCCAGAGTTTAACCTAACGTCAGCTCCCCCCTGCAGTCCATTCTATGTAGAGGACCAGGAACACTCTGGGAAGAGACCTAAAGTGCACGGAAACCGAGGGGCGAGAGTGTCAgccagtgaggagagggggcAGGACCGGGCCAGGAGGAACAGGGAGAAGAAACGTGGAGGCTACTGCGAGTGCTGCACGCTCAAATACAACAACATCAAAGCTCACCTGCGGAGTGAGCAGCACAAGGCCTTCTCCAGAAGTGATGAGTACCTGGTGGTGGACAGGCTCATCACCACACTGCCCTTCAACTTCAGTCATGTCAAAACAACACAAACTCCAACCACAAGGTCAAAGTACAGCATAACCTCCCAGTTGTGTGTTCCTGGACCCAGCatacagatggaggaagagaaggagggaggtgtGGAAACCAAAGAGCTGAAGGGGGGATTAATGTCCCTCTGGTCTACTACAGTGGAGCCCCCTCTCTCCCAGAGTGTGGAAAACCCCTTGGAACAGCCTCGGAAGCGCAGCCGAGGAGCCCCTGTTCCCCACAGCACCAGCGAGGGGGAGAAGAGGTGCTCTTACGTCCCAGACAGACCCCAGCCCAAGCACAGATCCCTGTCCTGCAAACAACGCTGCCAACGGGGATCCCCCCGCAAGCACCGCCAGAGGGCTGGGCTGAGTCAGACACCTGTGTCTAATGCAGAAATAGACCCTTCTACCTTTGACTCTGTCGCTAACCCCAGACTTTCCCATCAGGGCCAGAGAACTCACACAGACAAAGATGGCCGCTCTTCATTTAGTCACACAGAGGATTTACAATGTGGCGATCCAGCTGGACGTGTGAAGGTCCCTTCCAGTCAGCACAAGGTTGCAGGGCCTTCAGAACACCACAAGCTCAGAGCTTTAGAGGAGAGTGAACTGAGTCATGATACGTTGGCTGGGGATACTCTTTCCGGGAATGCTGGGGGTGTTCCGGAGCTCGAGGCAGGTGACACGGAGACACACATCCCTCCTCCTGCCAGGACATTACAGAGGAGGGTCAGGGATTACAGACGGAAGAGAAGGAAAGTTGAGAAGCAGCAGAATGCTCAGGAGCAGGAAAAAACGTGCAATGTTCCCAGCAGCTCTCTGCTGAACCTCTGGCAGCTGTTCCACTCCAGTGAGGACATGGAGTGTGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATGGAGTGTGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATGGAGTGCGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATAGACTGGGAGTTCCAGGCCTTCCCcagctagagaggagaggggggggttaGGGTAACCCAGAATCTTCCCAATATGAGCGCTAACTTGTTACGGACTCACCATATGAACTTATTGTATGACAGTTTCATTGAGTGACATAGCAGATCTATATGGGAACCCATTGACTGTGGCTCTTTAAACCTATGacttctataaagggaatagttcCCTTCAGGTTGGGAGGGTGGTGGCGCAACACTGTTGTGTTGATTTAACCATGGCAGCTTCTAGTCTACCTGGCTATTTTAACATGACTGGTTTTATCTGGAGAACAGGCTGGAGCACTATCCTCGGTTCTGTACAACGCCTGCATGTGTTCTGGTGTCCAGAGGAACTGTATGGTTGTGTTTTTGGTATGTGgtattgtacattttttttttattaaaagggATACAACCGAAGGTC
>XM_036967172.1
ATTTTTCGAAGCGGGAAAGGACATAGAACATCTATGGCACAACAAAATATTATGGCAACAAAGTAATCTTAGCGGAACCAAAACAATTTAAAGATACTATTGAAATTTCGTGAAAATCGGTTGTAACAAATGTCAATTTACGGAAATATATTGTTTTACAAGACCACAGGCTCTCACGAGACGCACCCAAAAGTCTACAAAACCCCGTTTACAAGACCCCAAACTCGCTGATAAGGGGCACAAGTCAGCCTCGAAAAGCCATGCCAAACCACCATGTGAATCGTATCCTGCCCCAAAAAAGCCTTTCACTGGGAAACTATTCTACTTAGATTTGCCATCAAACAGAAGAGCAGAGACATTAGAGAATGATATCAAAAGGTTTGGAGGGACGGTGGAGAAATTCTTCAGCAAGGAGATCAAGTACCTGGTGTCTAATAAGAGAGAGGCCAGGTATGTGCAGTGTCATGGCCGCGACCCTCTTGTCCCAAGCCCTGACTCTGGGCACAGCTCCCCCCACCCTCGCCCCCATCCCGGCAGCCACAGAGACAGCCTCAAAGGAAGCTCCCAGGGCCAGGCAAACATGGTGGTCATAAGCAGGGGCAAGTCTTTTGTGAAGAGAGTTGTAAAAGAGCAGGTGAGAATACAGGTCAACGAGATCCTAACCAATGCTCTGGAGTGGGGAGTGAAAATCCTGTATattgatgATGTAATGGCTTATATGGAAAAGAAGAAAAGTAATGTTAAGTATACTGCTGAAAAGCCAACCGCAACCACAGCTGCTGTCAAAAAAAGTGCCAAAAGAGAACCTACAGGAAAACCATCCTTCCAGAAGTATAAGGGTGGAAGGATCCGTAAACCCTTTGTAAAGGTAGTGGACTCCAGCAGACATTACCGTCCAATTTATCTGGCCATGCCGAACATGCCAGAGTTTAACCTAACGTCAGCTCCCCCCTGCAGTCCATTCTATGTAGAGGACCAGGAACACTCTGGGAAGAGACCTAAAGTGCACGGAAACCGAGGGGCGAGAGTGTCAgccagtgaggagagggggcAGGACCGGGCCAGGAGGAACAGGGAGAAGAAACGTGGAGGCTACTGCGAGTGCTGCACGCTCAAATACAACAACATCAAAGCTCACCTGCGGAGTGAGCAGCACAAGGCCTTCTCCAGAAGTGATGAGTACCTGGTGGTGGACAGGCTCATCACCACACTGCCCTTCAACTTCAGTCATGTCAAAACAACACAAACTCCAACCACAAGGTCAAAGTACAGCATAACCTCCCAGTTGTGTGTTCCTGGACCCAGCatacagatggaggaagagaaggagggaggtgtGGAAACCAAAGAGCTGAAGGGGGGATTAATGTCCCTCTGGTCTACTACAGTGGAGCCCCCTCTCTCCCAGAGTGTGGAAAACCCCTTGGAACAGCCTCGGAAGCGCAGCCGAGGAGCCCCTGTTCCCCACAGCACCAGCGAGGGGGAGAAGAGGTGCTCTTACGTCCCAGACAGACCCCAGCCCAAGCACAGATCCCTGTCCTGCAAACAACGCTGCCAACGGGGATCCCCCCGCAAGCACCGCCAGAGGGCTGGGCTGAGTCAGACACCTGTGTCTAATGCAGAAATAGACCCTTCTACCTTTGACTCTGTCGCTAACCCCAGACTTTCCCATCAGGGCCAGAGAACTCACACAGACAAAGATGGCCGCTCTTCATTTAGTCACACAGAGGATTTACAATGTGGCGATCCAGCTGGACGTGTGAAGGTCCCTTCCAGTCAGCACAAGGTTGCAGGGCCTTCAGAACACCACAAGCTCAGAGCTTTAGAGGAGAGTGAACTGAGTCATGATACGTTGGCTGGGGATACTCTTTCCGGGAATGCTGGGGGTGTTCCGGAGCTCGAGGCAGGTGACACGGAGACACACATCCCTCCTCCTGCCAGGACATTACAGAGGAGGGTCAGGGATTACAGACGGAAGAGAAGGAAAGTTGAGAAGCAGCAGAATGCTCAGGAGCAGGAAAAAACGTGCAATGTTCCCAGCAGCTCTCTGCTGAACCTCTGGCAGCTGTTCCACTCCAGTGAGGACATGGAGTGTGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATGGAGTGTGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATGGAGTGCGAGTTCAGAGGCTTTCCCAGCTGTTCCACTCCAGTGAGGACATAGACTGGGAGTTCCAGGCCTTCCCcagctagagaggagaggggggggttaGGGTAACCCAGAATCTTCCCAATATGAGCGCTAACTTGTTACGGACTCACCATATGAACTTATTGTATGACAGTTTCATTGAGTGACATAGCAGATCTATATGGGAACCCATTGACTGTGGCTCTTTAAACCTATGacttctataaagggaatagttcCCTTCAGGTTGGGAGGGTGGTGGCGCAACACTGTTGTGTTGATTTAACCATGGCAGCTTCTAGTCTACCTGGCTATTTTAACATGACTGGTTTTATCTGGAGAACAGGCTGGAGCACTATCCTCGGTTCTGTACAACGCCTGCATGTGTTCTGGTGTCCAGAGGAACTGTATGGTTGTGTTTTTGGTATGTGgtattgtacattttttttttattaaaagggATACAACCGAAGGTC
>TU249730
GAAGCGGGAAAGGACATAGAACATCTATGGCACAACAAAATATTATGGCAACAAAGTAATCTTAGCGGAACCAAAACAATTTAAAGATACTATTGAAATTTCGTGAAAATCGGTTGTAACAAATGTCAATTTACGGAAATATATTGTTTTACAAGACCACAGGCTCTCACGAGGTATATATTAACTTTTAGCCAGTgagttagcaagctaacgttacttagtagctagttagctggcagATTCCACTTCCTGTAGTTTAAAAAACAGGCTATAAAAACAAAGTTTAAATTGCAGTGGTATGGTTTTGTTGCTAGCTAGGGTCTGTTCGTTTTCTTTGAAGTCATATTTTTCATTTTAAACTTCTCTAACTATGTCTATTTACATTACTCATTAAacttatttttgttttatttttaaagctAACGATTTTATGCAGTTTAGCTAGATAACGTTACAACGGTCAACGTTAGCATCCATTAACTCAGTTTGTAAACATGTCTATTTCTTACAACACAGGAGAATACAATGATATTCTATTCTCCTCTTAAATTATGAAATCTAGACGCACCCAAAAGTCTACAAAACCCCGTTTACAAGACCCCAAACTCGCTGATAAGGGGCACAAGTCAGCCTCGAAAAGCCATGCCAAACCACCATGTGAATCGTATCCTGCCCCAAAAAAGCCTTTCACTGGGAAACTATTCTACTTAGATTTGCCATCAAACAGAAGAGCAGAGACATTAGAGAATGATATCAAAAGGTTTGGAGGGACGGTGGAGAAATTCTTCAGCAAGGAGATCAAGTACCTGGTGTCTAATAAGAGAGAGGCCAGGTATGTGCAGTGTCATGGCCGCGACCCTCTTGTCCCAAGCCCTGACTCTGGGCACAGCTCCCCCCACCCTCGCCCCCATCCCGGCAGCCACAGAGACAGCCTCAAAGGAAGCTCCCAGGGCCAGGCAAACATGGTGGTCATAAGCAGGGGCAAGTCTTTTGTGAAGAGAGTTGTAAAAGAGCAGGTTTGTTAATTAAGATCCTCACTAATGAGTTTGGC

Function

NR:

description
PREDICTED: protein DBF4 homolog A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587946.2 False 2685 mRNA 0.49 14 6794547 6811294
XM_021587937.2 False 2732 mRNA 0.50 13 6794550 6811294
XM_036967172.1 False 2683 mRNA 0.50 13 6794553 6811294
TU249730 True 1051 TUCP 0.45 4 6794560 6807670

Neighbor

gene id symbol gene type direction distance location
LOC110507774 LOC106605985 coding upstream 18067 6773881 ~ 6777798 (+)
LOC110507743 LOC106605986 coding upstream 21483 6754839 ~ 6773064 (+)
LOC110507826 LOC106576069 coding upstream 81880 6659724 ~ 6712667 (+)
LOC110507805 LOC106606004 coding upstream 140437 6642503 ~ 6654110 (+)
LOC118936368 NA coding upstream 159509 6632114 ~ 6635038 (+)
LOC110508266 LOC106511201 coding downstream 17389 6828683 ~ 6929400 (+)
LOC110520781 osgin2 coding downstream 126306 6937600 ~ 6947976 (+)
LOC110508323 LOC106575347 coding downstream 168201 6979131 ~ 6988449 (+)
them4 LOC106592246 coding downstream 181773 6993067 ~ 6996424 (+)
LOC110520784 LOC106575322 coding downstream 205397 7016691 ~ 7045216 (+)
G218986 NA non-coding upstream 59049 6735020 ~ 6735498 (+)
G218966 NA non-coding upstream 93200 6700848 ~ 6701347 (+)
G218892 NA non-coding upstream 185063 6556777 ~ 6609484 (+)
G219026 NA non-coding downstream 4992 6816286 ~ 6816579 (+)
G219063 NA non-coding downstream 51645 6862939 ~ 6865651 (+)
G220134 NA non-coding downstream 142855 6954149 ~ 6954739 (+)
G220125 NA non-coding downstream 165710 6977004 ~ 6977467 (+)
G218971 NA other upstream 75384 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 162946 6624575 ~ 6631601 (+)
LOC110520771 fam171a1 other upstream 187538 6560989 ~ 6607009 (+)
G218842 LOC106605951 other upstream 339345 6450338 ~ 6455202 (+)
LOC110534143 tmem67 other upstream 532190 6259904 ~ 6277154 (+)
LOC110536044 LOC106575458 other downstream 536998 7348131 ~ 7357408 (+)
G220435 NA other downstream 548374 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 566964 7378258 ~ 7381563 (+)

Expression


Co-expression Network