them4 (LOC106592246)


Basic Information

Item Value
gene id them4
gene name LOC106592246
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6993067 ~ 6996424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588780.2
GGTTACATGGGGCGGTTAGATACACATGAAAGTCATTCTACCGGCAAAAACCAGAGGCGAGACAAAATTGACAAAAGCTCCGTATTTATCTTCCTGTTGTTAGTTTGTTACAGTAGAACGTTATAGTGCGATGTTAGGTTTGATTCTGAATGTGTATTGCTATCATACCTCAGCCATTAGTCAGTAAAGCTAAAGGACTAACTAGTAGTAACCGTAACGTTACagtagataacgttagctaggttaCATTAGCTAATTTACTTGTAGTTACATCAGAATAGGGCTTGGCAATCTTACCCCAGCATTGTCATCATGATACGAACAGGAGGAGTGCAGCAGATTGCCAGGGGACTATGCCAAATAATGGGACGTGAAATCTCAAAGGGAAATTTCAACACCAACATCAGTCAAATGACTCCAAGAGGAACTCTCCAGCTTCCCTGGTCCTCTATCAACAGTGTCCGAACCATGGCGGTGTTGCCCTGGCCTTTCTCTTTCCAGCCACGGGACTTCAGCCTGCCCAACTCGTCCTGGGGCTCCGACATGAGGCGTCTGTATGAGCACTATAACAGCCAGTGTGAGGTAGAGACAGATGACGGAGAGAAGAAGTGGGGGGTCTGGAGAAGGCTGCCCAGCTATAACCGCTCCCTCAAGTACGCCACAGGTGGGGTGTATTTGAGTAAGATCATTCAGTCGAAGGCACGTCTGTTCACGCGGAAcatcagggagcagggagcagggttCGAGTACGTTGTGTTTGTCAACAAGCAGgagcagaagtgtgtgtgtgtgttccaggctgGCCACCTACTGGAGGGACCCCCGGGGCACGTCCATGGGGGGGCAATAGCTACCATGATTGACACTGTAACGGGGACCCACGCCACCTACCTCTCTGGGCCTGTCATGACTGCCAACCTCAACATCAACTACCGCAGCCCCATCTCATTGGGTAGTACAGTGCTGCTCACCTGCTCACTGGATAAGAAGGAGGGACGGAAAACCTTTGTTTCCTGTCAAGTGACCAACACGGACAGCTCCAAACTACACACAGAGGCCACAGgGCTGTTTCTGTCAATCACAATGGGACACCTATTAGGAGGATGATGGATAGGCCAGCTCATCGACCAACCAGACGCTACAAACACACAACATCAGAAACAGCACTGACTTCCAAGGGGGTGTGTTTGTCTGCACACAAATGTTTGGGTGTATATCAGTACCTGAGTGTGGGAGTGTGTATGCTTGAGTGTGGGAGTGTGTATGCTTGAGTGTGGGAGTGTGtatgcttgagtgtgtgtgtgtgtgtgtgtgtggttctgacTGCCAGATCCAGTAATCTTCTTAACTCTAGCAGTTTGCCTGAGACACCTGATGCCTTGTGCTCCACTGACATAgtatacagatactgtatatggatattgtacctctctttctccactgttACACACTCCTGGACAACCAGCTCCAGTCAGAGTGAAGCTCATAACCTCTGGTATATTATATTCAGGTCGAGGCTGTGAATACAACTTTTCTGAACCCTTCTTCCCGACAGCTAAAGGTCCCGACACTTCTGCATGTGAAGAATTCTCTACTTTACACACCTCCCTTCACATTTCTCAGTCAATTGTGACTGATAATCTTCATGTTTTACCAGTGAAACGTCCATGCAGCATCTGCATACCTGTGTCTAGTTTCAATCATAGCACATCTTTTGCCTAGTGGCACGTGCTGTTGAGTTTTGGCCACATGAGAGAAAAATGTGCCTATTTGCACAATCATCCTAAAATCTCATAAGAAATGAGGTGGCGTTTTTGTATTACAGTAATTTTATACTACGCTATTATATTGGGTTCTGTTATGTAGAATACCATCATTATGTGATCTGGCAAACATTGATCTAACTTTATTAAACAAGCACCATTCACCTGAGTAGCTTGTTCTCTAGTAGAACAGAGACTGTGTAAAGAAGCTTCGGGACCTTTAGCCGTCGGAATGAGGGGTCTAGAAAAGTTGGATCCACAGCCACTCCGATATATTTCATggatagtttattttttatttatataattCTGAATAATTTATTAGGTCTTTTACAGTTTGAGGTTTGAATCATTGCTGATACGTTATTATGTGACCATTATGACCTCTTGAATAAAGCTTTACCTCTTGGGTACTGTA

Function

NR:

description
acyl-coenzyme A thioesterase THEM4-like

GO: NA

KEGG:

id description
K16339 THEM4, CTMP; acyl-coenzyme A thioesterase THEM4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588780.2 True 2181 mRNA 0.45 6 6993067 6996424

Neighbor

gene id symbol gene type direction distance location
LOC110508323 LOC106575347 coding upstream 5300 6979131 ~ 6988449 (+)
LOC110520781 osgin2 coding upstream 45091 6937600 ~ 6947976 (+)
LOC110508266 LOC106511201 coding upstream 63667 6828683 ~ 6929400 (+)
LOC110507732 LOC106576036 coding upstream 181773 6794547 ~ 6811294 (+)
LOC110507774 LOC106605985 coding upstream 216587 6773881 ~ 6777798 (+)
LOC110520784 LOC106575322 coding downstream 20267 7016691 ~ 7045216 (+)
LOC100135938 LOC106575366 coding downstream 50311 7046735 ~ 7061832 (+)
LOC110508369 LOC106575371 coding downstream 67194 7063618 ~ 7079482 (+)
LOC110508390 LOC100194679 coding downstream 84026 7080450 ~ 7084314 (+)
LOC110508380 LOC105029226 coding downstream 88182 7084606 ~ 7098905 (+)
G220125 NA non-coding upstream 15600 6977004 ~ 6977467 (+)
G220134 NA non-coding upstream 38328 6954149 ~ 6954739 (+)
G219063 NA non-coding upstream 127416 6862939 ~ 6865651 (+)
G220178 NA non-coding downstream 83256 7079680 ~ 7079902 (+)
G220184 NA non-coding downstream 105874 7102298 ~ 7103268 (+)
G220185 NA non-coding downstream 107331 7103755 ~ 7103963 (+)
G220186 NA non-coding downstream 108264 7104688 ~ 7104965 (+)
G218971 NA other upstream 273904 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 361466 6624575 ~ 6631601 (+)
LOC110536044 LOC106575458 other downstream 351868 7348131 ~ 7357408 (+)
G220435 NA other downstream 363244 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 381834 7378258 ~ 7381563 (+)
LOC118945274 LOC106575512 other downstream 449945 7437011 ~ 7447882 (+)
LOC110520790 LOC106606111 other downstream 1174283 8170634 ~ 8178058 (+)

Expression


Co-expression Network