LOC110508369 (LOC106575371)


Basic Information

Item Value
gene id LOC110508369
gene name LOC106575371
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7063618 ~ 7079482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967298.1
tggtgTTTCATAAAGAAAGTATGCATATTATCTCTGTTCCCCCCCGCCATTAAATCGATGTCTTTGCAGCCTTATTTAGAATGTTTTACGTACGAACCGGTCTAAGGGAGAtacacaaagtcataaaccagcctatttctacaatgtatcttcttacatttttatttgaaatCTAACCAGAACCACACTGCTGACTgtatgtctaaccttaaccccaaattAATACCAAATAGCACATTTTGGTTTTCATATATTTTTACGATATAGCCCATTTTGACTTTGCCGCTGGCCATCTACTAGCTAGGTGGATACCCATGCCAAAAATTTGTTCTATCTGTTCCGATACCGGCCAATCCAAAATGGCGACCGCCGTTCCAGTTGATTCGGGATTGACTGCTCCGACAGACATTAGGACTCAGTTCTGGAGGAGAGCCTTGCAGAGAGGGTCCAGTGCGTCTCGGAAAGTGGCATCCCCCGAGatGCCTGGATCAAGTCAGAGTATGAAGAAGACCATTGGACACAGAGGAGTTGAGACGAACACTGGAGAGACCACCTATAAGAAGACTACGTCGTCAGCCCTGAAAGGAGCAATTCAGCTGGGCATCACTCACACTGTGGGCAGCCTGAGTCAGAAGGCTGAGAGGGATGTTCTCATGCAGGACTTTGTGGTGGTCGAGAGCATCTTCTTCCCTAGtgaaGGCAGTAACCTGACCCCTGCCCACCACTACAGTGATTTCAGGTTTAAGACCTACGCCCCCATCGCCTTCCGCTACTTCAGAGAACTCTTTGGCATCCGTCCAGACGACTACCTGTACTCTCTGTGTAACGATGGCCTGATAGAGCTGTCTAACTCCGGCGCCAGTGGCTCTCTCTTCTACGTGTCCAGTGATGATGAGTTCATTATCAAGACAGTGCAGCACAAAGAGGCTGAGTTTCTCCAGAAGCTACTACCAGGATACTTTATGAACCTGAATCAGAACAAACGGACCCTGCTCCCTAAGTTCTACGGTCTGTACTGCATCCAGGCGGGAGGGAAGAACATCCGCCTGGTGGTGATGAACAACCTGCTGCCCCGCGTGGTCCACATGCACCATAAGTACGACATGAAGGGTTCCACCTATAAGAGACGGGCCTCAGCCAAGGAGAGGGACAAGACTTTTCCCACCTTTAAAGACCTGGACTTCATCCAGGACCTGCCTGATGGACTACTGCTGGAGACGGACAACTACAACGCCCTTAGCAAGACCATCCAGAGAGACTGcctgCTCCTGCAGAGTTTTAAAATCATGGACTACAGTCTACTGGTGGGGATCCATAACCTGGAGCAggctagtagagagagggagcgaggtgGGGGGCAGATGGGGGACAGTGGGGGGTCAGAGGGGGCGGTGACCCCAGACCAGCGCCGACCCCAGGCCCAGAAAAGTCTATACTGCACAGCCATGGAGTCTATACAGGGAGAGGCCCGCGGGAAGGGAGCCCTGGAGTCTGAGGACCATATGGGCGGGATCCCAGCCAGGAACTCTAAAGGAGAGAGGTTGCTGGTCTTTATCGGCATCATCGACATTCTGCAGTCTTACAGGTTCATCAAGAAGTTGGAACACTCGTGGAAGGCCCTCGTCCATGATGGGGATACAGTGTCGGTGCACAGACCAGGCTTCTACGCTGAGCGCTTCCAACAATTCATGTGTAACACAGTGTTCAAGAAGATCCCATTGAAGCTCTCCCCATCCAAGAAGTCTCGTGGTGGGGGTCCGGGGGGTCTGAGGAGAGCTCCTACCCTGGGAGGCCCCCCCCTCTCCCACGCtgctggacagtctgtggtggactCTCGACTCGTCTACCAATCACACTTCAACAAGGCTGACGCAGAGGGAGACAGTGGCATGCAGTCGGGCAGGCCAGACCTGGTGCCAAGGACACCTCCCCTGGCGGGAGGGTCAGGGGATGCAGAGGCCAACTTTTCCACGTCCTCATTAGGAAGCACAGgactcacctcctcctctcctctgctacagtcAGTAGGGGTTGAGGTACATAGAGCAGTAACAAGCACAGACCAAGACCACGGTGTCTCCCACAGtatggGTGCGGAAGTGGAAGCGTCAGGTGATCAGTCGGGTAATGAAGATGCCATCTCACTATCAGACATTGTCCCAGAGACTAACATCTGCTTTTAACAACTGATCTGGAGTCATCTGAGGAAAAGGTGATTCTGGAACCAAGGAGATGCTGGATTAAACCCATTGCAGCGTCTGGTGACTTGACTGGACCACAGCACAACAGACACCTCACCCTTTGGTGCTCAAAGGGCGGTACACTTGCAACACAGACACTACAGAACATATGAACTAATGCAATATGAACAAGTCTGCCATCTTAAAGTTTCAAGAATCGTATTTATTGTATTTGTATTATGACCTTGTAGCCTGAAATGATTCATAAGTTGTACATGTAGATGATTGTACGTATAATAATGTATTCTTCTGACAGGAAATGTCAGACTTAAGTAGTGTATTGCATATGGGAGGGGATTGTTTGACAATTTCACTTTTTATATTTCATGCTTGATTTTGATAGTGATATATTCTCCATTGTTCTGGGGCAAGGATGTCCCATGCTTTTCTACGTTGAATGTTTCACACAGCCTCCGAGCCAATGTTGCTGGTTACCGTCTATGCTTCAATTACTCTATTTTTACTCTGCCtgtataaaatatgtatataGTAGTCACGGAAATGCCTTCTCATGCTGCCTGTTCCTTCTACCATCTTTCAGTGATGTAATGTTTTTCATATTGGCTCTGATTTTAGAATAAACTTATTTTCTAAATGTT
>XM_021588862.2
gtgTTTCATAAAGAAAGTATGCATATTATCTCTGTTCCCCCCCGCCATTAAATCGATGTCTTTGCAGCCTTATTTAGAATGTTTTACGTACGAACCGGTCTAAGGGAGAtacacaaagtcataaaccagcctatttctacaatgtatcttcttacatttttatttgaaatCTAACCAGAACCACACTGCTGACTgtatgtctaaccttaaccccaaattAATACCAAATAGCACATTTTGGTTTTCATATATTTTTACGATATAGCCCATTTTGACTTTGCCGCTGGCCATCTACTAGCTAGGTGGATACCCATGCCAAAAATTTGTTCTATCTGTTCCGATACCGGCCAATCCAAAATGGCGACCGCCGTTCCAGTTGATTCGGGATTGACTGCTCCGACAGGGTCCAGTGCGTCTCGGAAAGTGGCATCCCCCGAGatGCCTGGATCAAGTCAGAGTATGAAGAAGACCATTGGACACAGAGGAGTTGAGACGAACACTGGAGAGACCACCTATAAGAAGACTACGTCGTCAGCCCTGAAAGGAGCAATTCAGCTGGGCATCACTCACACTGTGGGCAGCCTGAGTCAGAAGGCTGAGAGGGATGTTCTCATGCAGGACTTTGTGGTGGTCGAGAGCATCTTCTTCCCTAGtgaaGGCAGTAACCTGACCCCTGCCCACCACTACAGTGATTTCAGGTTTAAGACCTACGCCCCCATCGCCTTCCGCTACTTCAGAGAACTCTTTGGCATCCGTCCAGACGACTACCTGTACTCTCTGTGTAACGATGGCCTGATAGAGCTGTCTAACTCCGGCGCCAGTGGCTCTCTCTTCTACGTGTCCAGTGATGATGAGTTCATTATCAAGACAGTGCAGCACAAAGAGGCTGAGTTTCTCCAGAAGCTACTACCAGGATACTTTATGAACCTGAATCAGAACAAACGGACCCTGCTCCCTAAGTTCTACGGTCTGTACTGCATCCAGGCGGGAGGGAAGAACATCCGCCTGGTGGTGATGAACAACCTGCTGCCCCGCGTGGTCCACATGCACCATAAGTACGACATGAAGGGTTCCACCTATAAGAGACGGGCCTCAGCCAAGGAGAGGGACAAGACTTTTCCCACCTTTAAAGACCTGGACTTCATCCAGGACCTGCCTGATGGACTACTGCTGGAGACGGACAACTACAACGCCCTTAGCAAGACCATCCAGAGAGACTGcctgCTCCTGCAGAGTTTTAAAATCATGGACTACAGTCTACTGGTGGGGATCCATAACCTGGAGCAggctagtagagagagggagcgaggtgGGGGGCAGATGGGGGACAGTGGGGGGTCAGAGGGGGCGGTGACCCCAGACCAGCGCCGACCCCAGGCCCAGAAAAGTCTATACTGCACAGCCATGGAGTCTATACAGGGAGAGGCCCGCGGGAAGGGAGCCCTGGAGTCTGAGGACCATATGGGCGGGATCCCAGCCAGGAACTCTAAAGGAGAGAGGTTGCTGGTCTTTATCGGCATCATCGACATTCTGCAGTCTTACAGGTTCATCAAGAAGTTGGAACACTCGTGGAAGGCCCTCGTCCATGATGGGGATACAGTGTCGGTGCACAGACCAGGCTTCTACGCTGAGCGCTTCCAACAATTCATGTGTAACACAGTGTTCAAGAAGATCCCATTGAAGCTCTCCCCATCCAAGAAGTCTCGTGGTGGGGGTCCGGGGGGTCTGAGGAGAGCTCCTACCCTGGGAGGCCCCCCCCTCTCCCACGCtgctggacagtctgtggtggactCTCGACTCGTCTACCAATCACACTTCAACAAGGCTGACGCAGAGGGAGACAGTGGCATGCAGTCGGGCAGGCCAGACCTGGTGCCAAGGACACCTCCCCTGGCGGGAGGGTCAGGGGATGCAGAGGCCAACTTTTCCACGTCCTCATTAGGAAGCACAGgactcacctcctcctctcctctgctacagtcAGTAGGGGTTGAGGTACATAGAGCAGTAACAAGCACAGACCAAGACCACGGTGTCTCCCACAGtatggGTGCGGAAGTGGAAGCGTCAGGTGATCAGTCGGGTAATGAAGATGCCATCTCACTATCAGACATTGTCCCAGAGACTAACATCTGCTTTTAACAACTGATCTGGAGTCATCTGAGGAAAAG

Function

NR:

description
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like isoform X2

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0016307 phosphatidylinositol phosphate kinase activity molecular_function

KEGG:

id description
K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967298.1 False 2839 mRNA 0.49 18 7063618 7079482
XM_021588862.2 True 2171 mRNA 0.52 16 7063620 7075300

Neighbor

gene id symbol gene type direction distance location
LOC100135938 LOC106575366 coding upstream 1786 7046735 ~ 7061832 (+)
LOC110520784 LOC106575322 coding upstream 18402 7016691 ~ 7045216 (+)
them4 LOC106592246 coding upstream 67194 6993067 ~ 6996424 (+)
LOC110508323 LOC106575347 coding upstream 75851 6979131 ~ 6988449 (+)
LOC110520781 osgin2 coding upstream 115642 6937600 ~ 6947976 (+)
LOC110508390 LOC100194679 coding downstream 968 7080450 ~ 7084314 (+)
LOC110508380 LOC105029226 coding downstream 5124 7084606 ~ 7098905 (+)
LOC110508400 NA coding downstream 30500 7109982 ~ 7113781 (+)
LOC110508415 LOC106605928 coding downstream 82468 7161950 ~ 7170443 (+)
LOC110536044 LOC106575458 coding downstream 268649 7348131 ~ 7357408 (+)
G220125 NA non-coding upstream 86151 6977004 ~ 6977467 (+)
G220134 NA non-coding upstream 108879 6954149 ~ 6954739 (+)
LOC110508266 LOC106511201 non-coding upstream 134218 6828683 ~ 6929400 (+)
G220178 NA non-coding downstream 198 7079680 ~ 7079902 (+)
G220184 NA non-coding downstream 22816 7102298 ~ 7103268 (+)
G220185 NA non-coding downstream 24273 7103755 ~ 7103963 (+)
G220186 NA non-coding downstream 25206 7104688 ~ 7104965 (+)
G220189 NA non-coding downstream 28483 7107965 ~ 7108182 (+)
LOC110507732 LOC106576036 other upstream 255948 6794547 ~ 6811294 (+)
G218971 NA other upstream 344455 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 432017 6624575 ~ 6631601 (+)
G220435 NA other downstream 280186 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 298776 7378258 ~ 7381563 (+)
LOC118945274 LOC106575512 other downstream 366887 7437011 ~ 7447882 (+)
LOC110520790 LOC106606111 other downstream 1091225 8170634 ~ 8178058 (+)

Expression


Co-expression Network