XLOC_021574 (SRMS)


Basic Information

Item Value
gene id XLOC_021574
gene name SRMS
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 17354154 ~ 17385249 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042831
TCCCCAAATcagctattttttatttgttaaatgaacAAAGCAATATGTACAACAACagctaaataagtaaataaaattaaaacaaaagtagCCTAAGGAACAAACAGCTGCAAAGATGTTTTATTGTATAACAACAATAGCATACAAAATATTGAGGAATACagtacttacattatttttacatCAAATCAATGGAGATTATATGTTTTAATTACAGGGGACGTATAAATTTAAAGAAATTCGTATAAAAAATGATTCCAAAATCGTACACATCCTTATAGCTGTTTTGCTTTCAATGTCTTTTAGGGACAAACAGCTCCAGAGGAGTTTAATACAAGCATGACGTCACCTCCATTATTTTCGGGTAGTGGTTTTAAAAGGAGCCAATATGTGCACGTTCAATGAAAGTCCCCGTCATGTACAGTAATAATAACGTGAACACGAACAGTGTTATTTCTCTCTTGCACGATTCCCCTGATGCATCTGATGTGCACGCAAATATTCCTCTTACAGAAGGGAGGTGTATTTTAATAATTGCAGAGCCTACGTTTAATGAGTGGATCTAAAAATAAACACACGCTGCTTTTGCCAGCTCAAGTGTGCGGCGCTTGCTTTCCAGTGAACAGATGATCGCACTACAGGAGCGAAGCGTCGCTCTCCGCCAAGTTTACGTACTGCGAAGCGTTTTGCTCCGGAGCGGAGAGAAGAGCGGCACCAAACACTGCGGCGCACTGCACCGCTCATTATAGGGCAGAAGAGGGACGCCATGGACAGATGCAGATGAAGAGAGCATGTTCTCCAACCACCACATCCATCCTCTCATCGTCTTCAAGTCTCGTTGAACAATCCAGCATGTCTTTTCCGCATACCTTGATCCATCCTGAAGCAGAACCGGTTTCACCTGATCCTCCGCTATGATCGCAGCAGCCCGTGCTTTAGCTCAACAAAGGCGATCCTGGTACAGAGTCAGTCGGTCACCCTCGGTGAGAGACCCACACGCCTCTTTAATTTTGCTCTCAACCCGTTTCGCTCGGTGGACGGCGGCCAAATATTCTGGCTACGCTGGAGTCCGTGGAGAGAGCGCGCTGGGATGGAGACGTGCTGTCGCTGCTGTATGCCATGCCTGAAGCGGTTATGGGACAGCATATGGCCCGAAAACTATCCGAACCTCCATCGTCCGGACGACATTCGTACCGTTTCAGGTGATATCCGGGTCCCGGCGCCCAAGAAGAAGCCCGCGCAGCTGTACGCGGCTCTGTTCGACTTTGTAGCCCGCAGTGAGGAAGAGCTGTCGGTGAAGGAAGGGGACAAACTGTCAGTCATAGAAAAGAGGGGAGATTATGTGTTCGCCAAGAAGCTGACGGGGTCCCTGGAGTCCGGACTGATCCCTGCCAATTATGTGGCCCTCTTGAAAGACGAATTCGCTAACTACAAATGGTACTATGGAAATATCAACAGACAAAAGGCTGAGAAGCTGCTTTTGTCTTCAGAGAATAAAACTGGCTCCTTCCTGGTGAGGATCAGCGAGAGCCACAGCGATGAATACACTATCTCTGCCAGAAGTGAAAACAGTGTCTTCCATTTCCGTATTCATCGCTCGCCAATTGGTGCTTACTTCGTGTCTGAGAAGATCTCTTTTGGCACTCTGGACGAGCTCATCAGATACTACCAGCAAAACTCCAGAAGCCTGGGATGCCACATAGACCAGCCGTGTGTACAGCGAAGGGAGTTATTTGACATGGAGCCATGGGAAAGACCCAGAGAGGAGTTTATGCTGGTCAAGAAGCTTGGAGAAGGCCATTTTGGAGAGGTCTGGGAAGCCATCtggaaaacacaaaagaagaaagtGGCCATCAAAATGCTCAAACAAGAGGACACAAAGCTGGATGAGTTTGTGAAGGAGGTTCACGCACTGAAGAACCTGCACCACCCCAAACTGATCGAGCTGCTGGCTCTGTGCTCACGAGGCGAACCCGTCTACATTGTCACAGAGCTCATGGCGAAAGGAAGTCTCAAATCATACCTTTCATCAGCGGAGGGTCAGCTGTTGACCTCGGCTCATTTGATCTACATGGCTGCTCAGATAGCAGAAGGTATGGCTTATCTGGAGGATCGGCACATTGTCCACAGAGATCTAGCAGCTCGAAACATCCTGGTTGGAAATGACCTGGTGTGTAAAGTGGCTGACTTTGGTCTGGCGCGCATCATCAAGgatAGTGTGTTTACAGCAAGTAAAACCACCAAGATTCCTGTGCGCTGGACCGCTCCAGAAGCTGCTCTCTATCAGAGATTCTCCGTCAAATCTGATGTCTGGTCTTTCGGAGTGCTGCTGTATGAGATGATGTCACGGGGAAAGATGCCCTATGATGGGAAGACTAATAAGGAAGTGATGGAGGCCCTGTCGTCAGGTTACAGGTTAGCGTGCCCAAACCACTGTCCACCAAACATCTACCGCATTATGTTGGAATGCTGGAACAACGAAGCTTCCAAACGGCCCTCGTTTCATGCCCTTCACAGTCAGCTGGACAACATCTACTCCAGACTTTACTTCAAAACCATTGAGGTGTGAAGATGTGGACAGAAATACGTACAAAGGAACGATTTGCATGGACAAAAGTGCACATATGATAGACTCTCTTTTTGaatgcttgttttaatgaagTTATGTGCAATGGTAAATGCTTGCTTAAGAGGATAAAAGAGCATGAAGAGTGGAGGAAATAGTGGATTAGAAATTGTGAAAAGGTGAAATGTGCATCTCCTTAATCTGACAGGGCCAGATTATCTGTAGCTTGTCATAGCAACCCTTGATCATAAGTGGATTTAAGTAGATGTTGAGCACTGATATGCACCATTATAATACACATCTTTTGAGCtgcacttactttttttttttgagctagAGTTGATCTGGCCCATTCAGTTTCTGAAGCAGTACTCTGGGGATAAAAGTtataaaagctgtcactgggCGGTATCAGCGGTACCTTTGCTAAATATGTACCTTAAAGTCTATGTTTAATCAAAATTTAGTTCATTTTGCTtgcacacattgttattctttaggt
>TCONS_00042832
TCCAACCACCACATCCATCCTCTCATCGTCTTCAAGTCTCGTTGAACAATCCAGCATGTCTTTTCCGCATACCTTGATCCATCCTGAAGCAGAACCGGTTTCACCTGATCCTCCGCTATGATCGCAGCAGCCCGTGCTTTAGCTCAACAAAGGCGATCCTGGTACAGAGTCAGTCGGTCACCCTCGGTGAGAGACCCACACGCCTCTTTAATTTTGCTCTCAACCCGTTTCGCTCGGTGGACGGCGGCCAAATATTCTGGCTACGCTGGAGTCCGTGGAGAGAGCGCGCTGGGATGGAGACGTGCTGTCGCTGCTGTATGCCATGCCTGAAGCGGTTATGGGACAGCATATGGCCCGAAAACTATCCGAACCTCCATCGTCCGGACGACATTCGTACCGTTTCAGGTGATATCCGGGTCCCGGCGCCCAAGAAGAAGCCCGCGCAGCTGTACGCGGCTCTGTTCGACTTTGTAGCCCGCAGTGAGGAAGAGCTGTCGGTGAAGGAAGGGGACAAACTGTCAGTCATAGAAAAGAGGGGAGATTATGTGTTCGCCAAGAAGCTGACGGGGTCCCTGGAGTCCGGACTGATCCCTGCCAATTATGTGGCCCTCTTGAAAGACGAATTCGCTAACTACAAGTAAGTGCTGTGCGTGACTATAGCGA

Function

symbol description
srms Enables protein tyrosine kinase activity. Involved in peptidyl-tyrosine autophosphorylation. Located in cytoplasm.

GO: NA

KEGG:

id description
ko01001 Protein kinases

Ensembl:

ensembl_id ENSDARG00000077783

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042831 False 3068 mRNA 0.46 8 17354154 17385249
TCONS_00042832 True 663 mRNA 0.55 1 17354951 17355613

Neighbor

gene id symbol gene type direction distance location
XLOC_021572 nol4lb coding upstream 7899 17220986 ~ 17346255 (+)
XLOC_021573 NA coding upstream 99397 17254498 ~ 17254757 (+)
XLOC_021571 BX927275.1 coding upstream 142348 17146315 ~ 17211806 (+)
XLOC_021570 commd7 coding upstream 240062 17102960 ~ 17114092 (+)
XLOC_021569 si:dkey-147f3.4 coding upstream 400918 16948049 ~ 16953236 (+)
XLOC_021575 ptk6b coding downstream 2076 17387325 ~ 17404011 (+)
XLOC_021576 NA coding downstream 27276 17412525 ~ 17447163 (+)
XLOC_021577 BX649300.3 coding downstream 52305 17437554 ~ 17465232 (+)
XLOC_021578 NA coding downstream 87870 17473119 ~ 17477448 (+)
XLOC_021579 BX649300.4 coding downstream 116065 17501314 ~ 17501428 (+)
XLOC_021565 AL732515.2 non-coding upstream 495121 16858917 ~ 16859033 (+)
XLOC_021561 NA non-coding upstream 555432 16798100 ~ 16798722 (+)
XLOC_021556 CU041345.1 non-coding upstream 908114 16444961 ~ 16446040 (+)
XLOC_021581 CR407550.1 non-coding downstream 271587 17656836 ~ 17659102 (+)
XLOC_021582 NA non-coding downstream 385175 17770424 ~ 17776345 (+)

Expression


Co-expression Network