LOC110508498


Basic Information

Item Value
gene id LOC110508498
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7573853 ~ 7575614 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589059.2
GTTACCGCAGGGTGGAGGTAGAGGCTAGTTGAGTTACCACAGGGGGGAGATAGAGGCTAGTTGTGCTTCTACATTAAGTGCCAAGGTGTACAGTAGGGTCTGGGGTTAGAGAATGTGCATTGGTGCAGGGTCCATGTCAGCAAATGTTCTATATTCAGACCTCTGGTGATAACATGTCCTATAGCTGCCATTCTCAGAATCATTTCAACCTGGACGATGACCACCACGCAGTCATCCAACAATATAGAAATCAGAATAGTGGGGCTTACTTATTTCAACCTGTTCAGAACACAAAACACATATTACCAGATGAGAGAAACAATAGACAGTCACACAGTCCTGGACAAAGAGAGGAGGCATATTGTGCGCTTTTACAGTAGAGCTGCATTGAGCAGGTGATACTGGAACTATCCTGGGGGGTGTACCGTAGGTGTGGTGGATAGATTATGCTTTACATAGGGAGAGACTGTTCCAGACTGGCAAAAACCctagagatgcagagagagctggagggagagagagaggggtggtggggtgcaGAACACACCCAGAGCCAGTGAACAGAATTTTTCATAACCAGGGGTGACTGGTGTGTCTGTGTTCCAGAGTGTAGaagaatataatagagaaagaTCAGGAGCTGAGAGAACACCCCCTGGTGTTGGTAGTGTTGATGTCACTATAGGAGGAGCTCTCTGGACAGGAGCTCTCTGTCCACTCACACCCAGTCCAACCCTGgtcttctcctcttcctttcctcctcaacTCCTCTGGGATTGACCTGACCCCTATTCCTCTCATCTCCCATTTCTATAATTTCTTCCTCCTGTCCTCCGTGTGGAGCAGTGCCACAGAGCCATGCACCCCCAGCGTCCTCTCCCCCAGGCCATGCCCTCCTCCCTCGGGCAGAACCTGCGTGACATGGCCATGGGCCTAGGCAGAGGGAAGAACTTCCTTGGTGGAAACATTGCCTACGGCTTCATCCAGTCCCTCAAGGAGTGCCTCTACTTCGTACTCTGCTGCTGGTGCATCAAGGAGatactggactgactgactgagacaccacgagagggagagaggggcacgAGGCTAAGATGTTAAACACAGCATGTGAAGCAGTTGCCCATGATGCAGTTCTGTATTCCTGTCTGGAGGCTTGGGAAACTGATGTGCTGCCTTGTGTATCAGAGGATCTCTGTCATTCTCGGATCCTGAGTCAGTCGGTCTGGagacctgcagtgtgtgtgtgtgtgtgtgcgtgtgaagcATCGTCTTAACACCAATctgctgatcctagacctgtggaGAAACCAAACCTGTGAGGCAATGGACATGGCTTTTGATGCTGCTTAGGTCACATTTAATTCCAAGTTTTTAAAATTTCTGTACAGTCTTAATATGCAAGGAATAAACAATGTAATATCtgattttgtttgtgtgtgccaaCCAGAgtcaggtgg

Function

NR:

description
lens epithelial cell protein LEP503-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589059.2 True 1460 mRNA 0.49 3 7573853 7575614

Neighbor

gene id symbol gene type direction distance location
LOC110508494 LOC106575071 coding downstream 334 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 21826 7531548 ~ 7552027 (-)
LOC110508472 LOC106573847 coding downstream 43670 7528026 ~ 7530317 (-)
LOC110508454 s10ag coding downstream 49309 7517195 ~ 7524544 (-)
LOC110508441 LOC106575525 coding downstream 62993 7506201 ~ 7510860 (-)
LOC110520788 LOC106593005 coding upstream 1394 7577008 ~ 7617193 (-)
si:dkey-246i14.3 LOC106570832 coding upstream 168744 7744358 ~ 7840475 (-)
LOC110520794 LOC105024462 coding upstream 638978 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 891322 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 1123421 8699031 ~ 8703263 (-)
G220866 NA non-coding downstream 21001 7552182 ~ 7552852 (-)
G220908 NA non-coding downstream 38428 7535216 ~ 7535425 (-)
G220894 NA non-coding downstream 69239 7504333 ~ 7504614 (-)
G220922 NA non-coding upstream 13913 7589527 ~ 7591887 (-)
G220929 NA non-coding upstream 53741 7629355 ~ 7630077 (-)
G220930 NA non-coding upstream 55438 7631052 ~ 7631372 (-)
G220933 NA non-coding upstream 58702 7634316 ~ 7634807 (-)
G220934 NA non-coding upstream 59835 7635449 ~ 7636122 (-)
LOC110520792 LOC106575505 other downstream 137682 7408252 ~ 7436195 (-)
G220751 NA other downstream 372432 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 773705 8345683 ~ 8350289 (-)
G221806 NA other upstream 818747 8394361 ~ 8410809 (-)
G221807 adar other upstream 927570 8503184 ~ 8523208 (-)
G221986 NA other upstream 1187505 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 1229083 8804651 ~ 8839679 (-)

Expression


Co-expression Network