krtcap2 (kcp2)


Basic Information

Item Value
gene id krtcap2
gene name kcp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8249753 ~ 8254163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598324.2
TCACGTTCGACTCCTACGTGTGCAACCTCTCATAGGTTCCGGGTAGCAAAAACGAAGTTTGTTCCTGGAGCTGCCTGTGTTTTGAAAGGATATCGAAAACGCATGATCTTCTGTGTCAAAAACGTAATTATTGATTAAATATCAAAACATGGcgGTGAACACAGGCACATCCCTGGTTCTGTCCAGTCTGTTCTCTGTGTTGGTGTTTGCTGGGATGCAGATGTTCAGCAGGCAGCTGGGCTCTACAGAGTTGCTCACCATCCTGGGAGGCTTCTTGGgctctgtcctcttcatctgcTCCCTCACAGCCTTCAGTAACCTGGAAAACCTCATCTTCGGCAAGGGATTCCAGGTCAAGATCTTCCCAGAGATCCTGGTGTGCCTGTGCCTCTCTCTGTTTGCCTCTGGGCTGGTGCACCGTGTGTGTGTCACCACATGTCTGATATTCTCTCTGTTCGCCCTCTACTACATCAACAAAGTGTCTGCTGCTCTGTACCAGGCAGCCGTTCCCACGGTAATGCCAGCCAAGGCTGCCAGCAAGGGCAAGAAAAAGAACTAAGTCACTAATACCGTCATCCAATCAGCATCCACTACAACGGCTAACCAGGCAAGGGAGAAATGGTGTAGGTTAGCCAATGACAGTGTACCCCAGTTTCCTTTTTGTAGGTCGAGCCAACCAGCATTCTTAGATATTTTCCTTGACTTCTTAACTCTATGATCACTGATCTCCAAGGACTGGACACCTCTCAGCAGTATAGATAACCTGAGACCAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACCAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACCAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACCAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACTAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACCAACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGATAACCTGAGACCTACCCAGCCCATCCATACACTGTTCTCAGCAGTATAGGAAACCTGAGACCTACCCAGCCCATCCATACACTGTTCTCAGCAGTCATGAGGCCTGGGGTGGAGGAAAGGAAGCAGTTTGGGATCTAGCCTGAATCATGTCTCTACATTCCCTACATCATCCCCATGTACTCAGCACATGCTTGTCTACAGATCCATATTTTTGATTGATGTCCTTTTTGTTTTGGTATAAAAACTTTGTTGTTAATGAATTTGTAATTAAAACCCATTGAAAATAG

Function

NR:

description
keratinocyte-associated protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598324.2 True 1346 mRNA 0.47 5 8249753 8254163

Neighbor

gene id symbol gene type direction distance location
LOC110520877 LOC106574226 coding upstream 100 8245228 ~ 8249653 (+)
LOC110520790 LOC106606111 coding upstream 73495 8170634 ~ 8178058 (+)
efna1b LOC106574320 coding upstream 90357 8148407 ~ 8159396 (+)
LOC110513974 efna3 coding upstream 163301 7941302 ~ 8086452 (+)
LOC110508507 LOC106575080 coding upstream 621786 7618368 ~ 7627967 (+)
LOC110520886 LOC106575974 coding downstream 10917 8265080 ~ 8266671 (+)
LOC110520887 LOC106606015 coding downstream 33802 8287965 ~ 8291009 (+)
LOC118945294 NA coding downstream 59627 8313790 ~ 8328604 (+)
LOC118936617 LOC106606009 coding downstream 74984 8329147 ~ 8331744 (+)
s100w LOC106574877 coding downstream 91275 8345438 ~ 8350294 (+)
G221232 NA non-coding upstream 35512 8211659 ~ 8214241 (+)
G221262 NA non-coding upstream 85737 8163294 ~ 8164016 (+)
G221242 NA non-coding upstream 129677 8119629 ~ 8120076 (+)
G221153 NA non-coding upstream 162491 8086667 ~ 8087262 (+)
G221306 NA non-coding downstream 29470 8283633 ~ 8328759 (+)
LOC110520859 LOC106606012 non-coding downstream 162957 8415151 ~ 8417910 (+)
G221394 NA non-coding downstream 225139 8479302 ~ 8480109 (+)
G221303 NA non-coding downstream 247574 8501737 ~ 8538421 (+)
LOC118945274 LOC106575512 other upstream 801876 7437011 ~ 7447882 (+)
G220445 LOC106575489 other upstream 868190 7378258 ~ 7381563 (+)
G220435 NA other upstream 884468 7359668 ~ 7365285 (+)
LOC110536044 LOC106575458 other upstream 896123 7348131 ~ 7357408 (+)
G221299 s10i other downstream 144908 8399071 ~ 8489067 (+)
G221514 NA other downstream 474814 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 507171 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 519884 8772336 ~ 8800464 (+)
G221526 LOC106591640 other downstream 586061 8840224 ~ 8908728 (+)

Expression


Co-expression Network