LOC110520797 (LOC106605883)


Basic Information

Item Value
gene id LOC110520797
gene name LOC106605883
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8680513 ~ 8684783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967855.1
CTGACATTGGTTCAGGGTTCAGGACACTTCTTGGTTCGTCTTCAGGACAGAGAGCTGGCCAACATCACTTACCTGGAGAACAGCAATGTTGtacagGTGTCTCCCCTGCGGCCCGGCCTCTCCTCCATCCTGGCCTATGATCTGTGTTTGACCTCTGCTGACCCTGCCGTGACCTCCATCTCCGTCTCTGACATCACTGACTTCCAGATAGATTTTGTTGACATTgtggaaGTGGACCACAGTGCTCTGGTTCGTGTGCGTGTTCTAGACTCTAACAGGCAACCGTTCCTACATCGTTACCTTCCTCTGATGCACCTCAAACTGACCCCCTCCTCACCCATCCTCACTGTGGAGCCTGCAGGGCCGTTGGACAGCGTCTCCGTAGGTTACCGTGTGTCGGGTCATACAGTGGGAGTGGTCAGTCTTCACCTGTCTGCAGTGGACAGCAGTGGGAGTGTCCGGACTTCCTCTCACAAACAGCTACAGGTCTACCCCAGATTCACCCTGCAGCCACGAAGTCTGGCACTGACACTGGGCAGCGTAGGACAGGTGAAGTGGGAGGGCGGCCCCCACCCCCAGTCCAGTGTGGGCTTCTCTGTGAGTGACAGCCGCATCGCCACGGTGACCGAGACAGGATTGGTCCATGGAGTGGCAGTGGGCATGGTCAAACTCAGAGGGGCGTTGCAGACCGTCACTCAGGACACCGGAGCTCTGCTCACCTtcgcacaggtacacacacacacacacacacacacacatatacttttGACTTGTTGATTATCTggttgtctttgtgtgtgtgtcaggatgaGGTGGATGTGGAGGTGTTTAACCTGACAGGGGTCAGGATCCAGGGCCCTCTGGTCAAACTGTCTGTGGGCACTGAGGTAACAGTGTAGCTTGTTTCTGTGTAAGTTTGTACGGTATTTGGGTGCGTATGTGCATGTGGTTTAGtaaccccagtgtgtgtgtgtgtgtgcgtgcatttagATGCCAGTGTATGTGATGGGCAGTGACAATAGTCAGAACCCCTTTGCTCTGGGCAGTGTAGAGTCTGGTCTCTCCTTCCACTGGAATCTGGGCAAGCTTGGAGTACTGGAGATACAAACCCGACACACTCAGG

Function

NR:

description
nuclear pore membrane glycoprotein 210-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967855.1 True 1123 mRNA 0.54 6 8680513 8684783

Neighbor

gene id symbol gene type direction distance location
LOC110520861 LOC106605898 coding upstream 22830 8639044 ~ 8657683 (+)
LOC110520869 LOC106605894 coding upstream 43147 8631406 ~ 8637366 (+)
LOC110520896 LOC106605891 coding upstream 52041 8532941 ~ 8628472 (+)
adar adar coding upstream 157296 8499728 ~ 8523217 (+)
LOC110520873 LOC106605892 coding upstream 223021 8436132 ~ 8457492 (+)
LOC110520846 LOC106605923 coding downstream 1754 8686537 ~ 8703190 (+)
LOC110520870 rab13 coding downstream 18927 8703710 ~ 8714435 (+)
LOC110520796 fam189b coding downstream 31213 8715996 ~ 8766590 (+)
LOC110520852 LOC106605924 coding downstream 82994 8767777 ~ 8771883 (+)
LOC110520836 LOC106605888 coding downstream 87553 8772336 ~ 8800464 (+)
G221499 NA non-coding upstream 1715 8678496 ~ 8678798 (+)
G221441 NA non-coding upstream 10998 8573930 ~ 8669515 (+)
G221458 NA non-coding upstream 37892 8611202 ~ 8642621 (+)
G221415 NA non-coding upstream 50424 8628664 ~ 8630089 (+)
G221439 NA non-coding upstream 111029 8567677 ~ 8569484 (+)
G221469 NA non-coding downstream 115727 8800510 ~ 8801779 (+)
G221545 NA non-coding downstream 137347 8822130 ~ 8825071 (+)
G221544 ash1l non-coding downstream 138341 8823124 ~ 8823805 (+)
G221299 s10i other upstream 191446 8399071 ~ 8489067 (+)
LOC110520790 LOC106606111 other upstream 508290 8170634 ~ 8178058 (+)
LOC118945274 LOC106575512 other upstream 1232636 7437011 ~ 7447882 (+)
G220445 LOC106575489 other upstream 1298950 7378258 ~ 7381563 (+)
G220435 NA other upstream 1315228 7359668 ~ 7365285 (+)
G221514 NA other downstream 44194 8728977 ~ 8732478 (+)
G221526 LOC106591640 other downstream 155441 8840224 ~ 8908728 (+)
G221525 LOC106605893 other downstream 163053 8847836 ~ 8878616 (+)

Expression


Co-expression Network