XLOC_021578



Basic Information


Item Value
gene id XLOC_021578
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 17473119 ~ 17477448 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044806
TTCCTGCACATTTATTTAACAGCTGTAATTCCGATCATTAATCCACATTACATCTCTCTGACACAGTACTTTATATTCATGCTACAACACTTTCAGCTGATTGATCCAGAACGCAAACAAGAAATCAGCCATTCTGTACAACGGTCATATATTCGCTTACATCCGACTacgtcattttttaaaaacattggaaaataataaataaaatattgtttctcATCACCATGTTTACACTATATCCTTCATTAATAACATGATTCTGTTTACATGTTAAATTCAGAAGATGCTCTGTTCATTCTTAAGAAACAAAAGCCTCTGGAAAGCGGAATCATGGAATAAAAGCAGGAAGACTGAACGGACACTATAGGAAAGTCCTTGTCTGTgttgtgtagatgtgtgtgtgtgtgtgtgtaggtttggGGAAAACAGATGTAAAAGGCAAACAAATATCAAGACTCGCTTCTGGCCCTGTACAGTGGAGCGTTTCAGGTTTTCCAATAATACAACAGAAGATCTGCAACTAACTAATCCCTCGTTGCCCACCGTGAGCTTGTGTGTACTGGTGGTCCCGTGTTTAATAGTTGGCGTCTGTCCGGTAGCTGGTGTGGTGAGAGTCTGCGGTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044806 True 623 lncRNA 0.39 2 17473119 17477448

Neighbor


gene id symbol gene type direction distance location
XLOC_021577 BX649300.3 coding upstream 7887 17437554 ~ 17465232 (+)
XLOC_021576 NA coding upstream 25956 17412525 ~ 17447163 (+)
XLOC_021575 ptk6b coding upstream 69108 17387325 ~ 17404011 (+)
XLOC_021574 SRMS coding upstream 87870 17354154 ~ 17385249 (+)
XLOC_021572 nol4lb coding upstream 126864 17220986 ~ 17346255 (+)
XLOC_021579 BX649300.4 coding downstream 23866 17501314 ~ 17501428 (+)
XLOC_021580 gid8b coding downstream 32346 17509794 ~ 17550653 (+)
XLOC_021581 CR407550.1 coding downstream 179388 17656836 ~ 17659102 (+)
XLOC_021582 NA coding downstream 292976 17770424 ~ 17776345 (+)
XLOC_021583 CR381647.3 coding downstream 305060 17782508 ~ 17783044 (+)
XLOC_021573 NA non-coding upstream 218362 17254498 ~ 17254757 (+)
XLOC_021571 BX927275.1 non-coding upstream 261313 17146315 ~ 17211806 (+)
XLOC_021565 AL732515.2 non-coding upstream 614086 16858917 ~ 16859033 (+)
XLOC_021561 NA non-coding upstream 674397 16798100 ~ 16798722 (+)
XLOC_021584 dre-mir-124-5 non-coding downstream 305965 17783413 ~ 17783541 (+)

Expression



Co-expression Network