LOC110536519 (LOC106573729)


Basic Information

Item Value
gene id LOC110536519
gene name LOC106573729
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9603201 ~ 9641233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968221.1
aaaagacagactgactgactgactgactgactgactgactggactggactggactggactggactggacagacATATAGAGGTGATAGGATAGTACAGTTGGAGTTTGACAAAGCTTTGGGTCAAGATGGGAGGGCATCGGAATTGGGTCACagaaaggagacagagggagagagagatggagagcgtgATCgaggggatggagaaagagagcacCGTGCCTAGACATCCCacaggacacatacacacagactgaCAAGCACATCACAGACTTCAACAAGCTaagagctcGTATCAGACGTTACTCTGACGTCATGCCCCTCCCAGACTCCTTCATCCAGAAGCAGCAGCTGGACGCCAGCATGGCTGACACCTTCCTGGAGCACCTGTGTCTGCTGGACATCGACCAGGAGCCAATCACAGCCCGCAACACAAGCATCATCTGCACCATCGggcctgCGTCTCGCTCCATCGCCAAACTGCAGGAGATGGTGAAGGCAGGAATGAACATCGCTCGACTCAACTTCTCTCATGGCTCTCATGAGTACCATGGTGAGACCATCAAGAACATCCGGGAGGCGGTCGAGACCATAACCACTGACCCTTTATATTACAGGCCGGTAGCCATCGCCTTGGATACCAAAGGCCCTGAAATACGCACAGGCCTGGTTCGAGGGACTGCAGAGCAGGAGGTGGAGCTGGAGCGTGGGGCCAGTGTGCGTGTGGTGACAGGGGAGGGGGACAGGGACAGTACGGATGGGAACGTCATCTGGGTGGACTACCCCAGTCTGCCTCAGGTCCTGGAGAAAGGAGGAAGGATCTATATCGACGACGGACTCATCGGACTAAAAGTCCTGGAGACAGgtCCAGACTGGGTGGAGGCACTGGTAGAGAGTGGAGGTGTTCTGGGCAGCCGTAAGGGGGTCAACCTGCCGGGGTGTGACCTGGTGGACATGCCCGCTGTGAGTGAGCGTGATGAGGGGGACCTGAGGTTCGGCGTGGCCCAGGGGGTGGACATGGTGTTCGCCAGCTTCATCCGCTGTGGCCAGGATGTCAGGGAGATCCGACGGGCCCTGGGGCCTTTCGGAAAGGACATCAAGGTGGTCAGCAAGGTGGAGAGTCGCCAGGGAGTAcataatttCTTGGAGATCCTGGCGGAGAGTGATGGGGTGATGGTTGCCAGGGGCGACCTGGGCATAGAGATCCCTGCAGAGAAAGTCTTCATCGCTCAGAAGATGATGATCGGACGTTGCAACTCCGCTGGCAAGCCTGTTATCTGTGCCACACAgatgtTGGAGAGCATGGTAGCCCACCCCAGGCCTACGCGTGCGGAGGGCAGTGACGTAGCTAACGCAGTGTTGGATGGAGCCGACTGTGTGATGCTCTCTGGGGAGACGGCTAAAGGACTGTTCCCTGTCGAGTCTGTGGCCATGATGCACTCGatCTGCAGGGAGGCAGAGGCAGCCATCTTCCAACAGCAGTTGTTTGAGGAGCTTCGTCGTCTGACCCCTCTGTCCAATGACCCTACTGAGGTCACTGCTATAGGAGCTGTAGAATCCTCCTTCAAATGCTGTGCTGGAGCTGTCATAGTACTCACTACTACTGGCAGgtcaGCCCAGCTCCTGTCCCGGTATCGCCCACGCTGTCCCATCGTCGCGGTAACAAGAAGTCCTCAGgTGGCACGTCAGGCCCAGCTGCTGAGGGGTGTGTTCCCAGTGCTGTTCCACCCCCTCCCTGCCCCCGTCTGGGCCGATGATGTAGACAACAGAGTCAACTTCGGCATGAAcatagGAAAGGCCAGGGGCTTCTTCAAGACAGGTGACATGGTGATCGTGGTGACCGGCTGGATCCCTGGTTCTGGTCACACTAACATCATGAGGGCAGTCCACGTGCCCTAAACACTCTGTTCTTATTGGACACTACCACTGACTGGCTGACAGGCCCACCAATCCTAAGTGGCACATAGCCTAACAGACACACTAACTGGAACACTAACTACATAGATAGCATAGAACTAGAATTAATAAATTTCCCTTATGTGGAGATGAAGTACATAAACAAAACAACAGTTTAGAGATTACGATGAAAAGTCAATATTTTTTCCATGTTCATTGAAAGTGATTTAAATGTAGACaatgtttttgtgtgtttattcAATTCTGTCTTGGAAGCACTGCCTCTCTCCAAATAAAGCTTGGAGCATAACCTTATCATAA
>XM_036968212.1
TGAGCACTGACTGAgaaaagacagactgactgactgactgactgactgactgactggactggactggactggactggactggacagacATATAGAGGTGATAGGATAGTACAGTTGGAGTTTGACAAAGCTTTGGGTCAAGATGGGAGctcGTATCAGACGTTACTCTGACGTCATGCCCCTCCCAGACTCCTTCATCCAGAAGCAGCAGCTGGACGCCAGCATGGCTGACACCTTCCTGGAGCACCTGTGTCTGCTGGACATCGACCAGGAGCCAATCACAGCCCGCAACACAAGCATCATCTGCACCATCGggcctgCGTCTCGCTCCATCGCCAAACTGCAGGAGATGGTGAAGGCAGGAATGAACATCGCTCGACTCAACTTCTCTCATGGCTCTCATGAGTACCATGGTGAGACCATCAAGAACATCCGGGAGGCGGTCGAGACCATAACCACTGACCCTTTATATTACAGGCCGGTAGCCATCGCCTTGGATACCAAAGGCCCTGAAATACGCACAGGCCTGGTTCGAGGGACTGCAGAGCAGGAGGTGGAGCTGGAGCGTGGGGCCAGTGTGCGTGTGGTGACAGGGGAGGGGGACAGGGACAGTACGGATGGGAACGTCATCTGGGTGGACTACCCCAGTCTGCCTCAGGTCCTGGAGAAAGGAGGAAGGATCTATATCGACGACGGACTCATCGGACTAAAAGTCCTGGAGACAGgtCCAGACTGGGTGGAGGCACTGGTAGAGAGTGGAGGTGTTCTGGGCAGCCGTAAGGGGGTCAACCTGCCGGGGTGTGACCTGGTGGACATGCCCGCTGTGAGTGAGCGTGATGAGGGGGACCTGAGGTTCGGCGTGGCCCAGGGGGTGGACATGGTGTTCGCCAGCTTCATCCGCTGTGGCCAGGATGTCAGGGAGATCCGACGGGCCCTGGGGCCTTTCGGAAAGGACATCAAGGTGGTCAGCAAGGTGGAGAGTCGCCAGGGAGTAcataatttCTTGGAGATCCTGGCGGAGAGTGATGGGGTGATGGTTGCCAGGGGCGACCTGGGCATAGAGATCCCTGCAGAGAAAGTCTTCATCGCTCAGAAGATGATGATCGGACGTTGCAACTCCGCTGGCAAGCCTGTTATCTGTGCCACACAgatgtTGGAGAGCATGGTAGCCCACCCCAGGCCTACGCGTGCGGAGGGCAGTGACGTAGCTAACGCAGTGTTGGATGGAGCCGACTGTGTGATGCTCTCTGGGGAGACGGCTAAAGGACTGTTCCCTGTCGAGTCTGTGGCCATGATGCACTCGatCTGCAGGGAGGCAGAGGCAGCCATCTTCCAACAGCAGTTGTTTGAGGAGCTTCGTCGTCTGACCCCTCTGTCCAATGACCCTACTGAGGTCACTGCTATAGGAGCTGTAGAATCCTCCTTCAAATGCTGTGCTGGAGCTGTCATAGTACTCACTACTACTGGCAGgtcaGCCCAGCTCCTGTCCCGGTATCGCCCACGCTGTCCCATCGTCGCGGTAACAAGAAGTCCTCAGgTGGCACGTCAGGCCCAGCTGCTGAGGGGTGTGTTCCCAGTGCTGTTCCACCCCCTCCCTGCCCCCGTCTGGGCCGATGATGTAGACAACAGAGTCAACTTCGGCATGAAcatagGAAAGGCCAGGGGCTTCTTCAAGACAGGTGACATGGTGATCGTGGTGACCGGCTGGATCCCTGGTTCTGGTCACACTAACATCATGAGGGCAGTCCACGTGCCCTAAACACTCTGTTCTTATTGGACACTACCACTGACTGGCTGACAGGCCCACCAATCCTAAGTGGCACATAGCCTAACAGACACACTAACTGGAACACTAACTACATAGATAGCATAGAACTAGAATTAATAAATTTCCCTTATGTGGAGATGAAGTACATAAACAAAACAACAGTTTAGAGATTACGATGAAAAGTCAATATTTTTTCCATGTTCATTGAAAGTGATTTAAATGTAGACaatgtttttgtgtgtttattcAATTCTGTCTTGGAAGCACTGCCTCTCTCCAAATAAAGCTTGGAGCATAACCTTATCATAA
>XM_036968218.1
TGAGCACTGACTGAgaaaagacagactgactgactgactgactgactgactgactggactggactggactggactggactggacagacATATAGAGGTGATAGGATAGTACAGTTGGAGTTTGACAAAGCTTTGGGTCAAGATGGGAGCAGGGCATCGGAATTGGGTCACagaaaggagacagagggagagagagatggagagcgtgATCgaggggatggagaaagagagcacCGTGCCTAGACATCCCacaggacacatacacacagactgaCAAGCACATCACAGACTTCAACAAGCTaagagctcGTATCAGACGTTACTCTGACGTCATGCCCCTCCCAGACTCCTTCATCCAGAAGCAGCAGCTGGACGCCAGCATGGCTGACACCTTCCTGGAGCACCTGTGTCTGCTGGACATCGACCAGGAGCCAATCACAGCCCGCAACACAAGCATCATCTGCACCATCGggcctgCGTCTCGCTCCATCGCCAAACTGCAGGAGATGGTGAAGGCAGGAATGAACATCGCTCGACTCAACTTCTCTCATGGCTCTCATGAGTACCATGGTGAGACCATCAAGAACATCCGGGAGGCGGTCGAGACCATAACCACTGACCCTTTATATTACAGGCCGGTAGCCATCGCCTTGGATACCAAAGGCCCTGAAATACGCACAGGCCTGGTTCGAGGGACTGCAGAGCAGGAGGTGGAGCTGGAGCGTGGGGCCAGTGTGCGTGTGGTGACAGGGGAGGGGGACAGGGACAGTACGGATGGGAACGTCATCTGGGTGGACTACCCCAGTCTGCCTCAGGTCCTGGAGAAAGGAGGAAGGATCTATATCGACGACGGACTCATCGGACTAAAAGTCCTGGAGACAGgtCCAGACTGGGTGGAGGCACTGGTAGAGAGTGGAGGTGTTCTGGGCAGCCGTAAGGGGGTCAACCTGCCGGGGTGTGACCTGGTGGACATGCCCGCTGTGAGTGAGCGTGATGAGGGGGACCTGAGGTTCGGCGTGGCCCAGGGGGTGGACATGGTGTTCGCCAGCTTCATCCGCTGTGGCCAGGATGTCAGGGAGATCCGACGGGCCCTGGGGCCTTTCGGAAAGGACATCAAGGTGGTCAGCAAGGTGGAGAGTCGCCAGGGAGTAcataatttCTTGGAGATCCTGGCGGAGAGTGATGGGGTGATGGTTGCCAGGGGCGACCTGGGCATAGAGATCCCTGCAGAGAAAGTCTTCATCGCTCAGAAGATGATGATCGGACGTTGCAACTCCGCTGGCAAGCCTGTTATCTGTGCCACACAgatgtTGGAGAGCATGGTAGCCCACCCCAGGCCTACGCGTGCGGAGGGCAGTGACGTAGCTAACGCAGTGTTGGATGGAGCCGACTGTGTGATGCTCTCTGGGGAGACGGCTAAAGGACTGTTCCCTGTCGAGTCTGTGGCCATGATGCACTCGatCTGCAGGGAGGCAGAGGCAGCCATCTTCCAACAGCAGTTGTTTGAGGAGCTTCGTCGTCTGACCCCTCTGTCCAATGACCCTACTGAGGTCACTGCTATAGGAGCTGTAGAATCCTCCTTCAAATGCTGTGCTGGAGCTGTCATAGTACTCACTACTACTGGCAGgtcaGCCCAGCTCCTGTCCCGGTATCGCCCACGCTGTCCCATCGTCGCGGTAACAAGAAGTCCTCAGgTGGCACGTCAGGCCCAGCTGCTGAGGGGTGTGTTCCCAGTGCTGTTCCACCCCCTCCCTGCCCCCGTCTGGGCCGATGATGTAGACAACAGAGTCAACTTCGGCATGAAcatagGAAAGGCCAGGGGCTTCTTCAAGACAGGTGACATGGTGATCGTGGTGACCGGCTGGATCCCTGGTTCTGGTCACACTAACATCATGAGGGCAGTCCACGTGCCCTAAACACTCTGTTCTTATTGGACACTACCACTGACTGGCTGACAGGCCCACCAATCCTAAGTGGCACATAGCCTAACAGACACACTAACTGGAACACTAACTACATAGATAGCATAGAACTAGAATTAATAAATTTCCCTTATGTGGAGATGAAGTACATAAACAAAACAACAGTTTAGAGATTACGATGAAAAGTCAATATTTTTTCCATGTTCATTGAAAGTGATTTAAATGTAGACaatgtttttgtgtgtttattcAATTCTGTCTTGGAAGCACTGCCTCTCTCCAAATAAAGCTTGGAGCATAACCTTATCATAA
>XM_036968223.1
ACCTGGTGCTATGCGCGTCTCCACATCCACAAAGTTGTCTTCGTTGCTGCTGCCTGAAACTCACAGctcGTATCAGACGTTACTCTGACGTCATGCCCCTCCCAGACTCCTTCATCCAGAAGCAGCAGCTGGACGCCAGCATGGCTGACACCTTCCTGGAGCACCTGTGTCTGCTGGACATCGACCAGGAGCCAATCACAGCCCGCAACACAAGCATCATCTGCACCATCGggcctgCGTCTCGCTCCATCGCCAAACTGCAGGAGATGGTGAAGGCAGGAATGAACATCGCTCGACTCAACTTCTCTCATGGCTCTCATGAGTACCATGGTGAGACCATCAAGAACATCCGGGAGGCGGTCGAGACCATAACCACTGACCCTTTATATTACAGGCCGGTAGCCATCGCCTTGGATACCAAAGGCCCTGAAATACGCACAGGCCTGGTTCGAGGGACTGCAGAGCAGGAGGTGGAGCTGGAGCGTGGGGCCAGTGTGCGTGTGGTGACAGGGGAGGGGGACAGGGACAGTACGGATGGGAACGTCATCTGGGTGGACTACCCCAGTCTGCCTCAGGTCCTGGAGAAAGGAGGAAGGATCTATATCGACGACGGACTCATCGGACTAAAAGTCCTGGAGACAGgtCCAGACTGGGTGGAGGCACTGGTAGAGAGTGGAGGTGTTCTGGGCAGCCGTAAGGGGGTCAACCTGCCGGGGTGTGACCTGGTGGACATGCCCGCTGTGAGTGAGCGTGATGAGGGGGACCTGAGGTTCGGCGTGGCCCAGGGGGTGGACATGGTGTTCGCCAGCTTCATCCGCTGTGGCCAGGATGTCAGGGAGATCCGACGGGCCCTGGGGCCTTTCGGAAAGGACATCAAGGTGGTCAGCAAGGTGGAGAGTCGCCAGGGAGTAcataatttCTTGGAGATCCTGGCGGAGAGTGATGGGGTGATGGTTGCCAGGGGCGACCTGGGCATAGAGATCCCTGCAGAGAAAGTCTTCATCGCTCAGAAGATGATGATCGGACGTTGCAACTCCGCTGGCAAGCCTGTTATCTGTGCCACACAgatgtTGGAGAGCATGGTAGCCCACCCCAGGCCTACGCGTGCGGAGGGCAGTGACGTAGCTAACGCAGTGTTGGATGGAGCCGACTGTGTGATGCTCTCTGGGGAGACGGCTAAAGGACTGTTCCCTGTCGAGTCTGTGGCCATGATGCACTCGatCTGCAGGGAGGCAGAGGCAGCCATCTTCCAACAGCAGTTGTTTGAGGAGCTTCGTCGTCTGACCCCTCTGTCCAATGACCCTACTGAGGTCACTGCTATAGGAGCTGTAGAATCCTCCTTCAAATGCTGTGCTGGAGCTGTCATAGTACTCACTACTACTGGCAGgtcaGCCCAGCTCCTGTCCCGGTATCGCCCACGCTGTCCCATCGTCGCGGTAACAAGAAGTCCTCAGgTGGCACGTCAGGCCCAGCTGCTGAGGGGTGTGTTCCCAGTGCTGTTCCACCCCCTCCCTGCCCCCGTCTGGGCCGATGATGTAGACAACAGAGTCAACTTCGGCATGAAcatagGAAAGGCCAGGGGCTTCTTCAAGACAGGTGACATGGTGATCGTGGTGACCGGCTGGATCCCTGGTTCTGGTCACACTAACATCATGAGGGCAGTCCACGTGCCCTAAACACTCTGTTCTTATTGGACACTACCACTGACTGGCTGACAGGCCCACCAATCCTAAGTGGCACATAGCCTAACAGACACACTAACTGGAACACTAACTACATAGATAGCATAGAACTAGAATTAATAAATTTCCCTTATGTGGAGATGAAGTACATAAACAAAACAACAGTTTAGAGATTACGATGAAAAGTCAATATTTTTTCCATGTTCATTGAAAGTGATTTAAATGTAGACaatgtttttgtgtgtttattcAATTCTGTCTTGGAAGCACTGCCTCTCTCCAAATAAAGCTTGGAGCATAACCTTATCATAA

Function

NR:

description
pyruvate kinase PKM

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0016310 phosphorylation biological_process
GO:0030955 potassium ion binding molecular_function
GO:0000287 magnesium ion binding molecular_function
GO:0004743 pyruvate kinase activity molecular_function

KEGG:

id description
K00873 PK, pyk; pyruvate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968221.1 False 2215 mRNA 0.54 13 9603201 9636842
XM_036968212.1 False 2076 mRNA 0.54 12 9603201 9636857
XM_036968218.1 False 2233 mRNA 0.54 13 9603201 9636857
XM_036968223.1 True 1994 mRNA 0.54 12 9603201 9641233

Neighbor

gene id symbol gene type direction distance location
LOC110520821 LOC106574299 coding downstream 8547 9559133 ~ 9594654 (-)
LOC110508584 LOC104949237 coding downstream 51558 9528874 ~ 9551643 (-)
LOC110508594 LOC106605789 coding downstream 77888 9515908 ~ 9525313 (-)
LOC110508582 LOC106575046 coding downstream 151952 9446264 ~ 9451249 (-)
LOC110508575 prpf3 coding downstream 202079 9390287 ~ 9401122 (-)
cyp11b cyp11b coding upstream 405 9641638 ~ 9653952 (-)
LOC118945353 LOC106594169 coding upstream 13060 9654293 ~ 9656911 (-)
LOC118944443 LOC106573533 coding upstream 24629 9665862 ~ 9673439 (-)
LOC110534283 LOC106573819 coding upstream 38525 9679758 ~ 9689081 (-)
LOC110536579 LOC106593149 coding upstream 67569 9708802 ~ 9713188 (-)
G222658 NA non-coding downstream 3544 9595705 ~ 9599657 (-)
G222657 NA non-coding downstream 7871 9595020 ~ 9595330 (-)
G222607 LOC106574954 non-coding downstream 106348 9494796 ~ 9496853 (-)
G222600 NA non-coding downstream 126301 9474040 ~ 9476900 (-)
G222511 NA non-coding downstream 157499 9445037 ~ 9445702 (-)
G222680 NA non-coding upstream 15900 9657133 ~ 9659694 (-)
G222685 NA non-coding upstream 34705 9675938 ~ 9676294 (-)
G222686 NA non-coding upstream 35247 9676480 ~ 9676700 (-)
G222665 NA non-coding upstream 90922 9732155 ~ 9735857 (-)
LOC110501040 LOC106605812 other downstream 484828 9101425 ~ 9118437 (-)
G222465 NA other downstream 507985 9093180 ~ 9095216 (-)
LOC110508696 ndufa3 other upstream 360182 10001415 ~ 10002941 (-)
G223070 NA other upstream 371728 10012961 ~ 10014892 (-)
LOC110508724 prpf31 other upstream 379415 10019313 ~ 10024005 (-)

Expression


Co-expression Network