Item | Value |
---|---|
gene id | LOC118945352 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 9612894 ~ 9622952 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC110494027 isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005040516.1 | False | 9947 | mRNA | 0.39 | 2 | 9612894 | 9622952 |
TU253846 | True | 2306 | lncRNA | 0.40 | 2 | 9620235 | 9622759 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110520820 | LOC107573682 | coding | upstream | 104631 | 9490333 ~ 9508263 (+) |
LOC118944441 | NA | coding | upstream | 126769 | 9485600 ~ 9486125 (+) |
LOC110520819 | LOC106575022 | coding | upstream | 129808 | 9463337 ~ 9483086 (+) |
LOC110520813 | LOC106605815 | coding | upstream | 625048 | 8982594 ~ 8987846 (+) |
LOC110517169 | LOC106605893 | coding | upstream | 674196 | 8932771 ~ 8938698 (+) |
LOC110536529 | LOC106573824 | coding | downstream | 66112 | 9688881 ~ 9692007 (+) |
LOC110536497 | LOC106574921 | coding | downstream | 102423 | 9725375 ~ 9764307 (+) |
LOC110508601 | LOC105018956 | coding | downstream | 145848 | 9768800 ~ 9882291 (+) |
LOC110520822 | LOC106605747 | coding | downstream | 263919 | 9886871 ~ 9888193 (+) |
LOC110508611 | rpl18 | coding | downstream | 270309 | 9893261 ~ 9900476 (+) |
G222346 | NA | non-coding | upstream | 220 | 9603200 ~ 9612674 (+) |
G222349 | NA | non-coding | upstream | 18842 | 9592937 ~ 9594052 (+) |
G222342 | NA | non-coding | upstream | 28294 | 9584216 ~ 9584600 (+) |
G222339 | NA | non-coding | upstream | 40158 | 9572530 ~ 9572736 (+) |
G222338 | LOC106574633 | non-coding | upstream | 40622 | 9571840 ~ 9572272 (+) |
G222366 | NA | non-coding | downstream | 23219 | 9646171 ~ 9669060 (+) |
G222371 | NA | non-coding | downstream | 33468 | 9656420 ~ 9657013 (+) |
G222381 | NA | non-coding | downstream | 56077 | 9679029 ~ 9679295 (+) |
G222354 | NA | non-coding | downstream | 59020 | 9681972 ~ 9683128 (+) |
G222345 | LOC106594812 | other | upstream | 1755 | 9606305 ~ 9611139 (+) |
G222287 | NA | other | upstream | 167190 | 9445047 ~ 9445704 (+) |
G222102 | NA | other | upstream | 544743 | 9067146 ~ 9068151 (+) |
G222089 | NA | other | upstream | 577061 | 9035358 ~ 9035833 (+) |
G222353 | LOC106573525 | other | downstream | 56808 | 9679760 ~ 9681752 (+) |
sphk2 | LOC106605743 | other | downstream | 280160 | 9900809 ~ 9916529 (+) |
LOC110508845 | LOC106605771 | other | downstream | 651173 | 10267749 ~ 10276176 (+) |
LOC110508886 | LOC106605776 | other | downstream | 688730 | 10306848 ~ 10314535 (+) |
LOC110520833 | LOC106575226 | other | downstream | 1093699 | 10716613 ~ 10767669 (+) |